RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ABRACLQ9P1F3 81 aa6.63□□□□□ -1.35
CSDE1-218ENST00000610726 ASH2LQ9UBL3 628 aa6.63□□□□□ -1.35
CSDE1-218ENST00000610726 ITGB1BP2Q9UKP3 347 aa6.63□□□□□ -1.35
CSDE1-218ENST00000610726 KCNIP3Q9Y2W7 256 aa6.63□□□□□ -1.35
CSDE1-218ENST00000610726 DOCK8Q8NF50 2099 aa6.63□□□□□ -1.35
CSDE1-218ENST00000610726 A0A087WUJ7 227 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TRDV1A0A1B0GX56 115 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ARRDC5A6NEK1 342 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 NTN1O95631 604 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 QDPRP09417 244 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 LIPCP11150 499 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PIPP12273 146 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF35P13682 527 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 GIFP27352 417 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 GNRHRP30968 328 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CSRP3P50461 194 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 C21orf58P58505 322 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SLC35D3Q5M8T2 416 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OVCH1Q7RTY7 1134 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PRR18Q8N4B5 295 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF454Q8N9F8 522 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 DTWD2Q8NBA8 298 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OR51D1Q8NGF3 324 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MFSD8Q8NHS3 518 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ANKRD9Q96BM1 317 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 FGGYQ96C11 551 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SGCZQ96LD1 299 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ACTR6Q9GZN1 396 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 DUSP15Q9H1R2 295 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SLC22A11Q9NSA0 550 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 FKBP14Q9NWM8 211 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 IL20Q9NYY1 176 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 COPZ2Q9P299 210 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PFDN2Q9UHV9 154 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TMEM184BQ9Y519 407 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TEX51A0A1B0GUA7 166 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CYR61O00622 381 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 GPR171O14626 319 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TNFSF14O43557 240 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ABHD16AO95870 558 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MT-CO3P00414 261 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 KNG1P01042 644 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 WNT1P04628 370 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CEBPGP53567 150 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 FXYD4P59646 89 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PSG6Q00889 435 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 IL11RAQ14626 422 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 GAB4Q2WGN9 574 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 RHBDD2Q6NTF9 364 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 NRARPQ7Z6K4 114 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZAR1Q86SH2 424 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CD163Q86VB7 1156 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 FAM83FQ8NEG4 500 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 DEFB124Q8NES8 71 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OR4D9Q8NGE8 314 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OR13C5Q8NGS8 318 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OR4Q3Q8NH05 313 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 C3orf49Q96BT1 292 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 VWCEQ96DN2 955 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PAPOLGQ9BWT3 736 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SLC19A3Q9BZV2 496 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 P4HTMQ9NXG6 502 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PAQR5Q9NXK6 330 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF224Q9NZL3 707 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 GLS2Q9UI32 602 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 KCNS2Q9ULS6 477 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 RCE1Q9Y256 329 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 HRH3Q9Y5N1 445 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CACNG2Q9Y698 323 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ARHGEF17Q96PE2 2063 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CCDC187A0A096LP49 1063 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 A0A0B4J2E0 115 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 A0A1B0GX12 115 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZSCAN5BA6NJL1 495 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF736B4DX44 427 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 EEF1E1-BLOC1S5C9J1V9 151 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 NPIPB8E9PQR5 432 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 RFPL3O75679 317 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MT-ND4P03905 459 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 GCH1P30793 250 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PSPHP78330 225 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 LSM11P83369 360 aaKnown RBP eCLIP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TEKQ02763 1124 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF117Q03924 483 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SELENBP1Q13228 472 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PLCXD3Q63HM9 321 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 USP51Q70EK9 711 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MOB3CQ70IA8 216 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CLDN22Q8N7P3 220 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 DNAJC5GQ8N7S2 189 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 OR4D11Q8NGI4 311 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TTC9Q92623 222 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TMEM165Q9HC07 324 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SLC25A19Q9HC21 320 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 FAIMQ9NVQ4 179 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms