RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TRAV1-2A0A0B4J238 106 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 IGHV3-20A0A0C4DH32 117 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PLRG1O43660 514 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 KNG1P01042 644 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 IFNGR1P15260 489 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 CLRN1P58418 232 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SEC61A1P61619 476 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 TFF2Q03403 129 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PLA1AQ53H76 456 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 FAM209AQ5JX71 171 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 FAM74A1Q5RGS3 127 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 GPR139Q6DWJ6 353 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SLC25A24Q6NUK1 477 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 CORO6Q6QEF8 472 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 CBLN3Q6UW01 205 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 UNQ6126/PRO20091Q6UXV3 157 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 IQCF2Q8IXL9 164 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 GTPBP8Q8N3Z3 284 aaPredicted RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 OR4K17Q8NGC6 315 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 OR10K1Q8NGX5 313 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 OR2G2Q8NGZ5 317 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 TSLPQ969D9 159 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PRSS27Q9BQR3 290 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PELOQ9BRX2 385 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 AICDAQ9GZX7 198 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 NXF5Q9H1B4 397 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SEMA6CQ9H3T2 930 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 CD207Q9UJ71 328 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 A0A1B0GV50 99 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 TMEM235A6NFC5 223 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 LEUTXA8MZ59 168 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 P2RY10O00398 339 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PHYHO14832 338 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF208O43345 1280 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 TLX3O43711 291 aaPredicted RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SUSD5O60279 629 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 FARS2O95363 451 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 THY1P04216 161 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ADRB1P08588 477 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ANKRD34CP0C6C1 535 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SLC2A1P11166 492 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 HTR2CP28335 458 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 RPL35P42766 123 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 CDKN2AP42771 156 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF41P51814 821 aaPredicted RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 TAS2R19P59542 299 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 HTRA4P83105 476 aaPredicted RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PRICKLE4Q2TBC4 344 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 FAM69BQ5VUD6 431 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 RHOUQ7L0Q8 258 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ARIH2OSQ8N7S6 290 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 PNLDC1Q8NA58 520 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 OR4C16Q8NGL9 310 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ZC3HAV1LQ96H79 300 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SPACA5Q96QH8 159 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF587Q96SQ5 575 aaPredicted RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 SELENOIQ9C0D9 397 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 FKRPQ9H9S5 495 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 DNAJB12Q9NXW2 375 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 RABL2AQ9UBK7 228 aaPredicted RBP6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 OR5V1Q9UGF6 321 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 RABL2BQ9UNT1 228 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 MOKQ9UQ07 419 aa6.26□□□□□ -1.41
SYNPO2-206ENST00000610556 hCG_1807616A0A1W2PRN6 198 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 MEGF11A6BM72 1044 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 ZIC2O95409 532 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 CBX7O95931 251 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 S100A9P06702 114 aaKnown RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 PPP3CBP16298 524 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 AMY2BP19961 511 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 COL9A1P20849 921 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 CD1CP29017 333 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 SDHAP31040 664 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 TNFRSF4P43489 277 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 LUMP51884 338 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 SLC22A6Q4U2R8 563 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 SLC35D3Q5M8T2 416 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 FCRL6Q6DN72 434 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 CD200R1LQ6Q8B3 271 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 C17orf107Q6ZR85 190 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF784Q8NCA9 323 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 OR5D18Q8NGL1 313 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 OR14A16Q8NHC5 309 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 NT5CQ8TCD5 201 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 PHOSPHO2Q8TCD6 241 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 ZPLD1Q8TCW7 415 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 DCUN1D4Q92564 292 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 KTI12Q96EK9 354 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 MOGAT1Q96PD6 335 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 MNTQ99583 582 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 WDR77Q9BQA1 342 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 EMC6Q9BV81 110 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 ST6GALNAC5Q9BVH7 336 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 SLC2A4RGQ9NR83 387 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 POLE3Q9NRF9 147 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 SLCO1C1Q9NYB5 712 aa6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 VSX1Q9NZR4 365 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-206ENST00000610556 COA3Q9Y2R0 106 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms