RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TDGF1P3P51864 188 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 DHRS2Q13268 280 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 C4orf17Q53FE4 359 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 GGNBP1Q5YKI7 109 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 CERS6Q6ZMG9 384 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 RABEPKQ7Z6M1 372 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 RTN4RL1Q86UN2 441 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-218ENST00000608440 FAM129CQ86XR2 697 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 SCN4BQ8IWT1 228 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 PIGXQ8TBF5 258 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 LCN9Q8WX39 176 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 ASB13Q8WXK3 278 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 EID2BQ96D98 161 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 OTUB2Q96DC9 234 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
CTCFL-218ENST00000608440 OR2M4Q96R27 311 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 S100A13Q99584 98 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 CYTL1Q9NRR1 136 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
CTCFL-218ENST00000608440 A0A1B0GTI1 187 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 SLC5A10A0PJK1 596 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 NPIPB8E9PQR5 432 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 F8VVB4 439 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 F8VWA3 439 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 M0R143 59 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 NPC1O15118 1278 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 XRCC3O43542 346 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 TCF21O43680 179 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 PRAMEF11O60813 436 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 CA11O75493 328 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 RPN2P04844 631 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 PCCBP05166 539 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 SRMP19623 302 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 FGF7P21781 194 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 MPZP25189 248 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 TIA1P31483 386 aaKnown RBP eCLIP11.46□□□□□ -0.574e-7■■■■□ 23.2
CTCFL-218ENST00000608440 KIR3DL2P43630 455 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 RPS23P62266 143 aaKnown RBP11.46□□□□□ -0.57
CTCFL-218ENST00000608440 RPS13P62277 151 aaKnown RBP11.46□□□□□ -0.57
CTCFL-218ENST00000608440 HIST2H3PS2Q5TEC6 136 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 FAM46CQ5VWP2 391 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 DMKNQ6E0U4 476 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-218ENST00000608440 OR2T2Q6IF00 324 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 MRM1Q6IN84 353 aaKnown RBP11.46□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 KCTD9Q7L273 389 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 SAMD8Q96LT4 415 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 CCNL2Q96S94 520 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-218ENST00000608440 G6PC3Q9BUM1 346 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 OR52A5Q9H2C5 316 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 NRIP3Q9NQ35 241 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 TTC3P53804 2025 aa11.46□□□□□ -0.57
CTCFL-218ENST00000608440 INSIG1O15503 277 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 HSPA12AO43301 675 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 B3GAT3O94766 335 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 CSN2P05814 226 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 DCNP07585 359 aaKnown RBP11.46□□□□□ -0.58
CTCFL-218ENST00000608440 CLTBP09497 229 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 CLUP10909 449 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 TYMPP19971 482 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 TAS2R41P59536 307 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 TAS2R50P59544 299 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 RASGEF1BQ0VAM2 473 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 ARSJQ5FYB0 599 aaPredicted RBP11.46□□□□□ -0.58
CTCFL-218ENST00000608440 NEK7Q8TDX7 302 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 ZBTB8AQ96BR9 441 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 RRNAD1Q96FB5 475 aaKnown RBP11.46□□□□□ -0.58
CTCFL-218ENST00000608440 DTD2Q96FN9 168 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 MYADMQ96S97 322 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 NCDNQ9UBB6 729 aa11.46□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 UMAD1C9J7I0 102 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 M0QYG6 137 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 TRGC2P03986 189 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 LINC00614P0C842 121 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 CR2P20023 1033 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 AFF3P51826 1226 aaKnown RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF177Q13360 481 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 TOMM34Q15785 309 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 DRAM2Q6UX65 266 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 MEPCEQ7L2J0 689 aaKnown RBP11.45□□□□□ -0.58
CTCFL-218ENST00000608440 SLC35F3Q8IY50 421 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 TEX19Q8NA77 164 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 OR5R1Q8NH85 324 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 HAVCR1Q96D42 359 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 GALNT14Q96FL9 552 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF607Q96SK3 696 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 CCDC187A0A096LP49 1063 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 A0A1W2PQH9 124 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 PRAMEF26H0Y7S4 382 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 H7C417 338 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 GYPBP06028 91 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 FURINP09958 794 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 AKAIN1P0CW23 69 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 GZMBP10144 247 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 CD81P60033 236 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 SLC7A9P82251 487 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 EGR3Q06889 387 aa11.45□□□□□ -0.58
CTCFL-218ENST00000608440 UPP1Q16831 310 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms