RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 ZIM2Q9NZV7 527 aa13.49□□□□□ -0.25
HDDC2-203ENST00000608284 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
HDDC2-203ENST00000608284 IGKV1D-42A0A075B6H8 117 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 PLSCR5A0PG75 271 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 ISPDA4D126 451 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 PLPP3O14495 311 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 MT-ATP6P00846 226 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 HIST1H2ABP04908 130 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 GCH1P30793 250 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 APLNRP35414 380 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 POLR2JP52435 117 aaKnown RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 UCP2P55851 309 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 RGS8P57771 180 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 PDLIM3Q53GG5 364 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 CEP85LQ5SZL2 805 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 HIST3H2AQ7L7L0 130 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 SLC16A14Q7RTX9 510 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 RANBP3LQ86VV4 465 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 C22orf15Q8WYQ4 148 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 CCL17Q92583 94 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 HIST1H2ACQ93077 130 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 MAL2Q969L2 176 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF566Q969W8 418 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF607Q96SK3 696 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 CENPHQ9H3R5 247 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 WDR55Q9H6Y2 383 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 EVA1AQ9H8M9 152 aa13.48□□□□□ -0.25
HDDC2-203ENST00000608284 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 TESQ9UGI8 421 aaKnown RBP13.48□□□□□ -0.25
HDDC2-203ENST00000608284 IGLV3-9A0A075B6K5 115 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 C11orf98E9PRG8 122 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 FOXH1O75593 365 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 SERPINB7O75635 380 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 BGLAPP02818 100 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF81P51508 661 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF84P51523 738 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 DEFA6Q01524 100 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 HSF2Q03933 536 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 BST1Q10588 318 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 OR1Q1Q15612 314 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 ARMCX4Q5H9R4 360 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 REEP3Q6NUK4 255 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 DHRS4L2Q6PKH6 230 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 GOLGA6L1Q8N7Z2 621 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 OR5J2Q8NH18 312 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 OR6X1Q8NH79 312 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 TMEM54Q969K7 222 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 ESM1Q9NQ30 184 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 THAP1Q9NVV9 213 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 UBAP1Q9NZ09 502 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF224Q9NZL3 707 aa13.47□□□□□ -0.25
HDDC2-203ENST00000608284 POM121CA8CG34 1229 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 RNF13O43567 381 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 MGRN1O60291 552 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 DEAF1O75398 565 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-203ENST00000608284 SNAP29O95721 258 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 NUDT7P0C024 238 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 KITP10721 976 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 CCL2P13500 99 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 PRTN3P24158 256 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 HTR2AP28223 471 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 ATP4BP51164 291 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 LCN2P80188 198 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 BAMBIQ13145 260 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF718Q3SXZ3 478 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 GTDC1Q4AE62 458 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 SWT1Q5T5J6 900 aaKnown RBP13.46□□□□□ -0.25
HDDC2-203ENST00000608284 TREML4Q6UXN2 200 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 SLC35D2Q76EJ3 337 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 ZNF584Q8IVC4 421 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 SIGLECL1Q8N7X8 197 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 RBM15BQ8NDT2 890 aaKnown RBP13.46□□□□□ -0.25
HDDC2-203ENST00000608284 OR1J1Q8NGS3 322 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 NFKBIDQ8NI38 313 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 POP5Q969H6 163 aaKnown RBP13.46□□□□□ -0.25
HDDC2-203ENST00000608284 SLC25A28Q96A46 364 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 SLC25A44Q96H78 314 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-203ENST00000608284 TMEM43Q9BTV4 400 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 CYSLTR2Q9NS75 346 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 TMEM38BQ9NVV0 291 aa13.46□□□□□ -0.25
HDDC2-203ENST00000608284 UBDO15205 165 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 DHHO43323 396 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 SPRY3O43610 288 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 IGHV3-13P01766 116 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 CCNOP22674 350 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 PPIBP23284 216 aaKnown RBP13.45□□□□□ -0.26
HDDC2-203ENST00000608284 SLC6A2P23975 617 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 LIPAP38571 399 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 CLRN1P58418 232 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 IL13RA1P78552 427 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 CDK6Q00534 326 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-203ENST00000608284 WDFY1Q8IWB7 410 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 OR4K5Q8NGD3 323 aa13.45□□□□□ -0.26
HDDC2-203ENST00000608284 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms