RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 POLR2EP19388 210 aaKnown RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 BCKDHBP21953 392 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 CEACAM8P31997 349 aaPredicted RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 MAP3K8P41279 467 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 RFX3P48380 749 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 PCYT1AP49585 367 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 GSCP56915 257 aaPredicted RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ABCE1P61221 599 aaKnown RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 PSMC5P62195 406 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 LCN2P80188 198 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 FCHO2Q0JRZ9 810 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ELAVL2Q12926 359 aaKnown RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 SNTA1Q13424 505 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 LAGE3Q14657 143 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 NCF4Q15080 339 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 PSMD5Q16401 504 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 UBE2SQ16763 222 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 XKR4Q5GH76 650 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 FAM120AOSQ5T036 256 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 STUMQ69YW2 141 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 CAPRIN2Q6IMN6 1127 aaKnown RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 FAHD2BQ6P2I3 314 aaPredicted RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 LRRC31Q6UY01 552 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 Q6ZS52 159 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 TRMT10CQ7L0Y3 403 aaKnown RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 SLC16A14Q7RTX9 510 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 SNX20Q7Z614 316 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 DCUN1D3Q8IWE4 304 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 MARVELD2Q8N4S9 558 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 NRACQ8N912 160 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZNF565Q8N9K5 539 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR4D10Q8NGI6 311 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR6F1Q8NGZ6 308 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 RPLP0P6Q8NHW5 317 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZNF461Q8TAF7 563 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 GPR151Q8TDV0 419 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 GATAD1Q8WUU5 269 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 TMED6Q8WW62 240 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 SORCS1Q8WY21 1168 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 BIRC7Q96CA5 298 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 FAHD2AQ96GK7 314 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 FOXN4Q96NZ1 517 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 CSPG4P5Q96PW8 444 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 NKX3-1Q99801 234 aaPredicted RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 SLC29A1Q99808 456 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZNF670Q9BS34 389 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR51M1Q9H341 326 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ATP13A3Q9H7F0 1226 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 GPATCH2LQ9NWQ4 482 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 TEX10Q9NXF1 929 aaPredicted RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZNF229Q9UJW7 825 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 NUP50Q9UKX7 468 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 FLVCR2Q9UPI3 526 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 PPIL1Q9Y3C6 166 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 MYO18AQ92614 2054 aaKnown RBP3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 COL4A2P08572 1712 aa3.27□□□□□ -1.89
IGHV3-29-201ENST00000604817 HECTD1Q9ULT8 2610 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 CFAP46Q8IYW2 2715 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 CABIN1Q9Y6J0 2220 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 IGLV3-22A0A075B6J6 115 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 TRBV9A0A0B4J1U6 114 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 IGHV2-70DA0A0C4DH43 119 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 WDR91A4D1P6 747 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 RAB19A4D1S5 217 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 MSGN1A6NI15 193 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 H3BNX3 289 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 K7ERI5 159 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 RAB29O14966 203 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 CALUO43852 315 aaPredicted RBP3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 EDIL3O43854 480 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 RAMP1O60894 148 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 FCN3O75636 299 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 PDE5AO76074 875 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 OAZ2O95190 189 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 BRI3O95415 125 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 C1orf105O95561 183 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 CLPTM1O96005 669 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 HPP00738 406 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 NGFP01138 241 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 PRB1P04280 392 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 ANXA5P08758 320 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 GATA1P15976 413 aaPredicted RBP3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 ATP5A1P25705 553 aaKnown RBP3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 CRATP43155 626 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 NR4A2P43354 598 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 XCR1P46094 333 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 NPBWR2P48146 333 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 RPS14P62263 151 aaKnown RBP3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 ERVK-25P63136 954 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 PLOD1Q02809 727 aaPredicted RBP3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 EIF2B1Q14232 305 aaKnown RBP3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 PON2Q15165 354 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 TAB1Q15750 504 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 PSG3Q16557 428 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 HLA-BQ31612 363 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 C9orf135Q5VTT2 229 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZNF470Q6ECI4 717 aa3.26□□□□□ -1.89
IGHV3-29-201ENST00000604817 REEP3Q6NUK4 255 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms