RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, human

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA3-208	ENST00000602726	EFCAB9	A8MZ26	197 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	CENPBD1	B2RD01	187 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TRMU	O75648	421 aa	Known RBP	18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	UBL3	O95164	117 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	RAB36	O95755	333 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	HSD17B1	P14061	328 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SERPINF1	P36955	418 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MNAT1	P51948	309 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	HIST3H3	Q16695	136 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	GKAP1	Q5VSY0	366 aa	Predicted RBP	18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	CLEC9A	Q6UXN8	241 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MBOAT2	Q6ZWT7	520 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	OAF	Q86UD1	273 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SLC22A24	Q8N4F4	322 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	OR51A7	Q8NH64	312 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MCHR2	Q969V1	340 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MRPL13	Q9BYD1	178 aa	Known RBP	18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TXNIP	Q9H3M7	391 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ANKRD19P	Q9H560	264 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	DENND2D	Q9H6A0	471 aa	Predicted RBP	18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TMEM38B	Q9NVV0	291 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MAGEL2	Q9UJ55	1249 aa		18.99	■□□□□ 0.63
PPFIA3-208	ENST00000602726	IGHV2OR16-5	A0A0B4J2B6	119 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NPIPB13	A6NJU9	1138 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	VSTM5	A8MXK1	200 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NPIPB4	C9JG80	1138 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SSX4	O60224	188 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FARS2	O95363	451 aa	Known RBP	18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	H1F0	P07305	194 aa	Known RBP	18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	OR8G3P	P0DMU2	310 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	PTDSS1	P48651	473 aa	Known RBP	18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ZNF84	P51523	738 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NUDT6	P53370	316 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	RAB1A	P62820	205 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MYBPC1	Q00872	1141 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	HGFAC	Q04756	655 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TOP3A	Q13472	1001 aa	Predicted RBP	18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TAF11	Q15544	211 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ARMC4	Q5T2S8	1044 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TBPL2	Q6SJ96	375 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TSEN54	Q7Z6J9	526 aa	Known RBP	18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SKA3	Q8IX90	412 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NUP37	Q8NFH4	326 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SEPHS2	Q99611	448 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NOX3	Q9HBY0	568 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ZNF224	Q9NZL3	707 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NDUFAF4	Q9P032	175 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	CD300A	Q9UGN4	299 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	CSPG4	Q6UVK1	2322 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ZAN	Q9Y493	2812 aa		18.98	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TRAV27	A0A087WT01	109 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726		H7C417	338 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	OR4A8	P0C604	315 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	RHCE	P18577	417 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MSX2	P35548	267 aa	Predicted RBP	18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	GIPR	P48546	466 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SLC9A3	P48764	834 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SNRPD2	P62316	118 aa	Known RBP	18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	KRT72	Q14CN4	511 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FXN	Q16595	210 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ANKDD1A	Q495B1	522 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	DEFB107A	Q8IZN7	70 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FAM86B1	Q8N7N1	296 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MS4A3	Q96HJ5	214 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TNFRSF13C	Q96RJ3	184 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FBXL3	Q9UKT7	428 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726		V9GYQ6	96 aa		18.97	■□□□□ 0.63
PPFIA3-208	ENST00000602726		A0A1W2PRQ8	180 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	hCG_2039718	K7EN88	272 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	PDE5A	O76074	875 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FAM107A	O95990	144 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ZNF14	P17017	642 aa	Predicted RBP	18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	GPR4	P46093	362 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	CTXN1	P60606	82 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	RPL27	P61353	136 aa	Known RBP	18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	DGCR6	Q14129	220 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ADIPOQ	Q15848	244 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SWI5	Q1ZZU3	235 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	MST1L	Q2TV78	715 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FGD3	Q5JSP0	725 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	PODNL1	Q6PEZ8	512 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726		Q71RC1	249 aa	Predicted RBP	18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	IGFN1	Q86VF2	1251 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	FITM2	Q8N6M3	262 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	OR4K5	Q8NGD3	323 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	OR13C2	Q8NGS9	318 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SLC7A13	Q8TCU3	470 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	HTRA1	Q92743	480 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	PYURF	Q96I23	114 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	C7orf34	Q96L11	122 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	NSMCE2	Q96MF7	247 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	SH3GL3	Q99963	347 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	ZNF346	Q9UL40	294 aa	Known RBP	18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726	TMEM5	Q9Y2B1	443 aa		18.96	■□□□□ 0.63
PPFIA3-208	ENST00000602726		B9A039	149 aa		18.95	■□□□□ 0.62
PPFIA3-208	ENST00000602726	LY6G6D	O95868	133 aa		18.95	■□□□□ 0.62
PPFIA3-208	ENST00000602726	PATE4	P0C8F1	98 aa		18.95	■□□□□ 0.62
PPFIA3-208	ENST00000602726	NR2C1	P13056	603 aa		18.95	■□□□□ 0.62
PPFIA3-208	ENST00000602726	ITGA2	P17301	1181 aa		18.95	■□□□□ 0.62
PPFIA3-208	ENST00000602726	THBS4	P35443	961 aa		18.95	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms