RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 TMCC3Q9ULS5 477 aa14.69□□□□□ -0.06
TRIM28-215ENST00000601150 PRRC2AP48634 2157 aaKnown RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF503-AS2A6NEH8 195 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 A6NIZ1 184 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ACOT8O14734 319 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 SMPD2O60906 423 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 KRT36O76013 467 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 IGKV3-15P01624 115 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 IGLV1-44P01699 117 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 NR2C1P13056 603 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ARR3P36575 388 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ACVR1BP36896 505 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 MAGEA2P43356 314 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF84P51523 738 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF133P52736 654 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 RAP1BP61224 184 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 RAP1AP62834 184 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 MYBPC1Q00872 1141 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 CHRNB3Q05901 458 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 BNIP1Q12981 228 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 FAM98BQ52LJ0 330 aaKnown RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 SMAP2Q8WU79 429 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 NANOS1Q8WY41 292 aaKnown RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 HDAC2Q92769 488 aaKnown RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 RSRC1Q96IZ7 334 aaKnown RBP14.68□□□□□ -0.06
TRIM28-215ENST00000601150 TSPAN32Q96QS1 320 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 KCNK17Q96T54 332 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 KCNS3Q9BQ31 491 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 ALG12Q9BV10 488 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 KATNB1Q9BVA0 655 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 SMURF2Q9HAU4 748 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 TMEM38BQ9NVV0 291 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 B3GNT2Q9NY97 397 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 SIGLEC7Q9Y286 467 aa14.68□□□□□ -0.06
TRIM28-215ENST00000601150 UNC119BA6NIH7 251 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 OR10H3O60404 316 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 PTP4A3O75365 173 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 DNAJC8O75937 253 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-215ENST00000601150 NDUFB2O95178 105 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 HLA-HP01893 362 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 CRYAAP02489 173 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 CD14P08571 375 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 CECR9P0C854 216 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 CD79AP11912 226 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF26P17031 533 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-215ENST00000601150 IFNGR2P38484 337 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 ERVK-25P63136 954 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 CD47Q08722 323 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 GSG1Q2KHT4 349 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 C10orf128Q5T292 105 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 PGM2L1Q6PCE3 622 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 ZER1Q7Z7L7 766 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 MDP1Q86V88 176 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 SLC22A24Q8N4F4 322 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 ARIH2OSQ8N7S6 290 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF519Q8TB69 540 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 FNDC8Q8TC99 324 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 NMD3Q96D46 503 aaKnown RBP14.67□□□□□ -0.06
TRIM28-215ENST00000601150 CXorf56Q9H5V9 222 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 FAIMQ9NVQ4 179 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 GRHPRQ9UBQ7 328 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 MOKQ9UQ07 419 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 LAMP3Q9UQV4 416 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 ATP23Q9Y6H3 246 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 PLCE1Q9P212 2302 aa14.67□□□□□ -0.06
TRIM28-215ENST00000601150 AQP12BA6NM10 295 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 E7EQL1 145 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 ATP6V1G2-DDX39BF2Z307 99 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 TNFRSF11BO00300 401 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 UBL3O95164 117 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 FARS2O95363 451 aaKnown RBP14.66□□□□□ -0.06
TRIM28-215ENST00000601150 DANCRP0C864 163 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 OR8G3PP0DMU2 310 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 RASSF2P50749 326 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 IDH3GP51553 393 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-215ENST00000601150 HMGA2P52926 109 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 NAAAQ02083 359 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 PIGFQ07326 219 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 NPRL3Q12980 569 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 PGGHGQ32M88 737 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 NRN1LQ496H8 165 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 B3GLCTQ6Y288 498 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 SKA3Q8IX90 412 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 AQP12AQ8IXF9 295 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 LRRC75A-AS1Q8N1F1 130 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 RBP7Q96R05 134 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 GPA33Q99795 319 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 DHRS9Q9BPW9 319 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 DENND2DQ9H6A0 471 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-215ENST00000601150 ADAM18Q9Y3Q7 739 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 LYVE1Q9Y5Y7 322 aa14.66□□□□□ -0.06
TRIM28-215ENST00000601150 ARHGEF9O43307 516 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 ATP5HO75947 161 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 SLC2A10O95528 541 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 SOD3P08294 240 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 CELA3BP08861 270 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 RAP2AP10114 183 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 FPR3P25089 353 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 NKX6-1P78426 367 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-215ENST00000601150 FMODQ06828 376 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms