RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ALDH3B1P43353 468 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 GZMMP51124 257 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 SEC24CP53992 1094 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 SRSF2Q01130 221 aaKnown RBP14.59□□□□□ -0.07
SCAF1-204ENST00000601038 DPPA2Q7Z7J5 298 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 LRP11Q86VZ4 500 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 RDH5Q92781 318 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 MYEF2Q9P2K5 600 aaKnown RBP14.59□□□□□ -0.07
SCAF1-204ENST00000601038 DUSP13Q9UII6 198 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 SLC22A23A1A5C7 686 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 HMGB1P1B2RPK0 211 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 KPNA4O00629 521 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 HPXP02790 462 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 QDPRP09417 244 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 UMPSP11172 480 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 ACHEP22303 614 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 DVL1P1P54792 670 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 TMEM33P57088 247 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 MRPS11P82912 194 aaKnown RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 MELKQ14680 651 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 MAD2L1BPQ15013 274 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 VMACQ2NL98 169 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 NRN1LQ496H8 165 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 METTL21CQ5VZV1 264 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 CCDC80Q76M96 950 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 SLC30A7Q8NEW0 376 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 SH3GL3Q99963 347 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 PRSS27Q9BQR3 290 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 MEPEQ9NQ76 525 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 ZNF346Q9UL40 294 aaKnown RBP14.58□□□□□ -0.08
SCAF1-204ENST00000601038 FZR1Q9UM11 496 aa14.58□□□□□ -0.08
SCAF1-204ENST00000601038 B4DSR2 109 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 BLOC1S5-TXNDC5H3BN57 136 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 IGHG1P01857 330 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 PCMT1P22061 227 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 GPR6P46095 362 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-204ENST00000601038 CRYBA2P53672 197 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 CYLC2Q14093 348 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-204ENST00000601038 CCNIQ14094 377 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 HIST3H3Q16695 136 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 RGS7BPQ6MZT1 257 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-204ENST00000601038 NANOGP8Q6NSW7 305 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 TMEM53Q6P2H8 277 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 NANOGNBQ7Z5D8 188 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 RFLNBQ8N5W9 214 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 SIKE1Q9BRV8 207 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 RACGAP1Q9H0H5 632 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 C1orf198Q9H425 327 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 RNF121Q9H920 327 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 NANOGQ9H9S0 305 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 NPHS2Q9NP85 383 aa14.57□□□□□ -0.08
SCAF1-204ENST00000601038 A0A1W2PPW3 197 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 CENPBD1B2RD01 187 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 FBP2O00757 339 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 MGRN1O60291 552 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 EDF1O60869 148 aaKnown RBP14.56□□□□□ -0.08
SCAF1-204ENST00000601038 PTHP01270 115 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 MT-ND1P03886 318 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 NAT2P11245 290 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 SRP14P37108 136 aaKnown RBP14.56□□□□□ -0.08
SCAF1-204ENST00000601038 CLRN1P58418 232 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 SELENOVP59797 346 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 SLC36A2Q495M3 483 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 CARM1Q86X55 608 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 PAQR4Q8N4S7 273 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-204ENST00000601038 OR4K5Q8NGD3 323 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 MCHR2Q969V1 340 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 SEPHS2Q99611 448 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 SH3GL1Q99961 368 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 MRPL13Q9BYD1 178 aaKnown RBP14.56□□□□□ -0.08
SCAF1-204ENST00000601038 CDH20Q9HBT6 801 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 GPR160Q9UJ42 338 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 SH3GLB1Q9Y371 365 aa14.56□□□□□ -0.08
SCAF1-204ENST00000601038 A0A0G2JND7 137 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 A0A1W2PRG6 482 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 TCF21O43680 179 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 SNAP29O95721 258 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 IGF2P01344 180 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 F13BP05160 661 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 FAM157BP0CG42 384 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 ZNF250P15622 560 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 FUT1P19526 365 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 RBM34P42696 430 aaKnown RBP14.55□□□□□ -0.08
SCAF1-204ENST00000601038 ZNF84P51523 738 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 RUNX1T1Q06455 604 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 RPL18Q07020 188 aaKnown RBP14.55□□□□□ -0.08
SCAF1-204ENST00000601038 SLC16A14Q7RTX9 510 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 HDDC2Q7Z4H3 204 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 OR1J2Q8NGS2 313 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 CLDND2Q8NHS1 167 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 YIPF5Q969M3 257 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 ZNF347Q96SE7 839 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 POLR2J2Q9GZM3 115 aaKnown RBP14.55□□□□□ -0.08
SCAF1-204ENST00000601038 POLR2J3Q9H1A7 115 aaKnown RBP14.55□□□□□ -0.08
SCAF1-204ENST00000601038 ZNF275Q9NSD4 429 aaPredicted RBP14.55□□□□□ -0.08
SCAF1-204ENST00000601038 TAAR3PQ9P1P4 343 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 BAG5Q9UL15 447 aa14.55□□□□□ -0.08
SCAF1-204ENST00000601038 SVEP1Q4LDE5 3571 aa14.54□□□□□ -0.08
SCAF1-204ENST00000601038 IGLV3-9A0A075B6K5 115 aa14.54□□□□□ -0.08
SCAF1-204ENST00000601038 MCIDASD6RGH6 385 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms