RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 C8orf33Q9H7E9 229 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 TAS2R5Q9NYW4 299 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 UBQLN2Q9UHD9 624 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 FBXL3Q9UKT7 428 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 A0A1W2PPC4 97 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 M0R233 179 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 PLGP00747 810 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 CSRP1P21291 193 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 KIR3DL2P43630 455 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 SLC35D2Q76EJ3 337 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 TMEM151BQ8IW70 566 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 SIX5Q8N196 739 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 OR52B4Q8NGK2 314 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 GPR148Q8TDV2 347 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 RADILQ96JH8 1075 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 NKX3-1Q99801 234 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 TMEM212A6NML5 194 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 RAD1O60671 282 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 NDUFB6O95139 128 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 LDOC1O95751 146 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 IFNGR1P15260 489 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 MNDAP41218 407 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 FASLGP48023 281 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 AP2S1P53680 142 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 EGR3Q06889 387 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 WDR38Q5JTN6 314 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF227Q86WZ6 799 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 DEFB119Q8N690 84 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 OR51D1Q8NGF3 324 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF417Q8TAU3 575 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 PELOQ9BRX2 385 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 ADAM19Q9H013 955 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 STEAP1Q9UHE8 339 aa18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 ARID1BQ8NFD5 2236 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-225ENST00000600733 PYCARD-AS1I3L0S3 204 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 XRCC3O43542 346 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 CREBL2O60519 120 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 HLA-DQA2P01906 255 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 FCER2P06734 321 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 FBXO45P0C2W1 286 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 GALNSP34059 522 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 RORAP35398 523 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 PCGF3Q3KNV8 242 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 YOD1Q5VVQ6 348 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF626Q68DY1 528 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 TTLL10Q6ZVT0 673 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 COMMD7Q86VX2 200 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 SDR16C5Q8N3Y7 309 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 OR4D10Q8NGI6 311 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 C4orf45Q96LM5 186 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 SLC46A1Q96NT5 459 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 NARFLQ9H6Q4 476 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 MSRAQ9UJ68 235 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 H0YIG0 161 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 I3L521 148 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 PDGFAP04085 211 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 CPN1P15169 458 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 PSMA6P60900 246 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 CLLU1Q5K131 121 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 NKAIN2Q5VXU1 208 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 NHLRC1Q6VVB1 395 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 DNM1P46Q6ZS02 220 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 MARCH3Q86UD3 253 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 SPICQ8N5J4 248 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 TSEN15Q8WW01 171 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 ADIPOR1Q96A54 375 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 SLC25A36Q96CQ1 311 aa18.29■□□□□ 0.52
SHKBP1-225ENST00000600733 FRG2CA6NGY1 282 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 SHOXO15266 292 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 NUDT14O95848 222 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 CXCR1P25024 350 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 CENPAP49450 140 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 GUCA2AQ02747 115 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 CSRP2Q16527 193 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 BIVMQ86UB2 503 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 OTOSQ8NHW6 89 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 LMX1AQ8TE12 382 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 MCHR2Q969V1 340 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 PPP1R14AQ96A00 147 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 DCBLD2Q96PD2 775 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 UTP23Q9BRU9 249 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 LAT2Q9GZY6 243 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 ELOVL3Q9HB03 270 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 PDE7BQ9NP56 450 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 TMEM14AQ9Y6G1 99 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 MEIS3P1A6NDR6 274 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 RBBP9O75884 186 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF432O94892 652 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 IGLV3-19P01714 112 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 BGLAPP02818 100 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 ITGA5P08648 1049 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 VSIG10L2P0DP72 767 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF250P15622 560 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 CXCL2P19875 107 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 CCKBRP32239 447 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 LTBRP36941 435 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 EFNA3P52797 238 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 EPHA4P54764 986 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 RASGEF1BQ0VAM2 473 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms