RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 SLC30A7Q8NEW0 376 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 OR4K5Q8NGD3 323 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 OR10A6Q8NH74 314 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 OR6X1Q8NH79 312 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 RDH5Q92781 318 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 TAMM41Q96BW9 452 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 INTS9Q9NV88 658 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 GMEB1Q9Y692 573 aa15.1■□□□□ 0.01
SHKBP1-223ENST00000600552 TRAPPC13A5PLN9 417 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 MCIDASD6RGH6 385 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 WNT9BO14905 357 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 DHHO43323 396 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 TCF21O43680 179 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 RGS9O75916 674 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 LYPD3O95274 346 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 BCL10O95999 233 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 CLPTM1O96005 669 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 SERPINA5P05154 406 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 C8BP07358 591 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 SAGP10523 405 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 FXNQ16595 210 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 THSD4Q6ZMP0 1018 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 ZNF627Q7L945 461 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 PATL1Q86TB9 770 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 GLCCI1Q86VQ1 547 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 TSPYL5Q86VY4 417 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 LRRC18Q8N456 261 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 PAQR4Q8N4S7 273 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 CLDND2Q8NHS1 167 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 YIPF5Q969M3 257 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 DENND2DQ9H6A0 471 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 NPHS2Q9NP85 383 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 TMEM38BQ9NVV0 291 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 SLC7A8Q9UHI5 535 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 FBXL3Q9UKT7 428 aa15.09■□□□□ 0.01
SHKBP1-223ENST00000600552 TPD52L2O43399 206 aaKnown RBP15.08■□□□□ 0
SHKBP1-223ENST00000600552 SHOX2O60902 331 aaPredicted RBP15.08■□□□□ 0
SHKBP1-223ENST00000600552 NCR1O76036 304 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 F13BP05160 661 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ITGA2P17301 1181 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 TNFRSF1BP20333 461 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 CCNOP22674 350 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 MAGEB1P43366 347 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 SELENOVP59797 346 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ERVS71-1P61550 626 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 GLO1Q04760 184 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ZP4Q12836 540 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 SF3A3Q12874 501 aaKnown RBP eCLIP15.08■□□□□ 0
SHKBP1-223ENST00000600552 SLC16A14Q7RTX9 510 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ZNF584Q8IVC4 421 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 SLC25A44Q96H78 314 aaPredicted RBP15.08■□□□□ 0
SHKBP1-223ENST00000600552 TSPAN32Q96QS1 320 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ZNF347Q96SE7 839 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 METTL17Q9H7H0 456 aaPredicted RBP15.08■□□□□ 0
SHKBP1-223ENST00000600552 ZNF275Q9NSD4 429 aaPredicted RBP15.08■□□□□ 0
SHKBP1-223ENST00000600552 METRNQ9UJH8 293 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ZNF229Q9UJW7 825 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 ZNF346Q9UL40 294 aaKnown RBP15.08■□□□□ 0
SHKBP1-223ENST00000600552 TRIM33Q9UPN9 1127 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 SH3GLB1Q9Y371 365 aa15.08■□□□□ 0
SHKBP1-223ENST00000600552 SVEP1Q4LDE5 3571 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 A0A0G2JND7 137 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 A0A1W2PRG6 482 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 B4DSR2 109 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 FAM157AC9JC47 383 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 IGHG1P01857 330 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 ACHEP22303 614 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 PCGF2P35227 344 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 ZNF84P51523 738 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 DVL1P1P54792 670 aaPredicted RBP15.07■□□□□ 0
SHKBP1-223ENST00000600552 TAS2R41P59536 307 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 CCL8P80075 99 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 RUNX1T1Q06455 604 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 AVPI1Q5T686 147 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 REP15Q6BDI9 236 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 TMEM154Q6P9G4 183 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 UGT2A3Q6UWM9 527 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 DEF8Q6ZN54 512 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 ZNF771Q7L3S4 317 aaPredicted RBP15.07■□□□□ 0
SHKBP1-223ENST00000600552 RFLNBQ8N5W9 214 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 DPP10Q8N608 796 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 PFN4Q8NHR9 129 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 SYNPRQ8TBG9 265 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 KAT8Q9H7Z6 458 aaKnown RBP15.07■□□□□ 0
SHKBP1-223ENST00000600552 HIF1ANQ9NWT6 349 aa15.07■□□□□ 0
SHKBP1-223ENST00000600552 ENTPD5O75356 428 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 PGA4P0DJD7 388 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 PGA3P0DJD8 388 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 FUT1P19526 365 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 PCMT1P22061 227 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 AQP2P41181 271 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 MVKQ03426 396 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 HSF2Q03933 536 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 PLP2Q04941 152 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 TBC1D28Q2M2D7 210 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 SLC36A2Q495M3 483 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 INTS11Q5TA45 600 aaKnown RBP15.06■□□□□ 0
SHKBP1-223ENST00000600552 FAHD2BQ6P2I3 314 aaPredicted RBP15.06■□□□□ 0
SHKBP1-223ENST00000600552 SHQ1Q6PI26 577 aaKnown RBP15.06■□□□□ 0
SHKBP1-223ENST00000600552 SLC30A8Q8IWU4 369 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms