RNA–Protein interactions for RNA: ENST00000597816.5

LTBP4-218, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-218	ENST00000597816	NPRL3	Q12980	569 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	DGCR6	Q14129	220 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	GSG1	Q2KHT4	349 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	ARMC4	Q5T2S8	1044 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	C11orf71	Q6IPW1	123 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	TMPRSS11F	Q6ZWK6	438 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	SLC22A24	Q8N4F4	322 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	SYT14	Q8NB59	555 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	OR51A7	Q8NH64	312 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	MCHR2	Q969V1	340 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	NSMCE2	Q96MF7	247 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	TNFRSF13C	Q96RJ3	184 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF347	Q96SE7	839 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	SEPHS2	Q99611	448 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	ADAM21	Q9UKJ8	722 aa		14	□□□□□ -0.17
LTBP4-218	ENST00000597816	NIPBL	Q6KC79	2804 aa	eCLIP	14	□□□□□ -0.17
LTBP4-218	ENST00000597816	VSTM5	A8MXK1	200 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	UBL3	O95164	117 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	CELA3B	P08861	270 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	INHBB	P09529	407 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	OR8G3P	P0DMU2	310 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	CALCR	P30988	508 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF84	P51523	738 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	CTXN1	P60606	82 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	RAB1A	P62820	205 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	VLDLR	P98155	873 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	PODNL1	Q6PEZ8	512 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	MEX3D	Q86XN8	651 aa	Known RBP	13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	SKA3	Q8IX90	412 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	FAM86B1	Q8N7N1	296 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	NOXO1	Q8NFA2	376 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	SLC7A13	Q8TCU3	470 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	CACNG6	Q9BXT2	260 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	SEC61A2	Q9H9S3	476 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	BARX1	Q9HBU1	254 aa	Predicted RBP	13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	TMEM38B	Q9NVV0	291 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	FBXL3	Q9UKT7	428 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF346	Q9UL40	294 aa	Known RBP	13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	TMEM5	Q9Y2B1	443 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	PMF1-BGLAP	U3KQ54	211 aa		13.99	□□□□□ -0.17
LTBP4-218	ENST00000597816	CSPG4	Q6UVK1	2322 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	RTTN	Q86VV8	2226 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	TRAV27	A0A087WT01	109 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	hCG_2039718	K7EN88	272 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ARPC2	O15144	300 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	MGRN1	O60291	552 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	FARS2	O95363	451 aa	Known RBP	13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	IGHV4-39	P01824	125 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	NR2C1	P13056	603 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF133	P52736	654 aa	Predicted RBP	13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	SMIM11A	P58511	58 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	RPL27	P61353	136 aa	Known RBP	13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	MYBPC1	Q00872	1141 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	HGFAC	Q04756	655 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	FHL1	Q13642	323 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	RAB35	Q15286	201 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	CLEC12B	Q2HXU8	276 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZBED5	Q49AG3	693 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	BIVM	Q86UB2	503 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	MYPOP	Q86VE0	399 aa	Predicted RBP	13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ARHGAP24	Q8N264	748 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	LRRC75A	Q8NAA5	344 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	NUP37	Q8NFH4	326 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	MCUR1	Q96AQ8	359 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF75A	Q96N20	296 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	RBP7	Q96R05	134 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	CA10	Q9NS85	328 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF224	Q9NZL3	707 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816		V9GYQ6	96 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	ARFGEF3	Q5TH69	2177 aa		13.98	□□□□□ -0.17
LTBP4-218	ENST00000597816	TLN2	Q9Y4G6	2542 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	TRIM64	A6NGJ6	449 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	TRIM64B	A6NI03	449 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816		H7C1Q1	480 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	CDC42EP2	O14613	210 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	NDUFS7	O75251	213 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	DIRAS1	O95057	198 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	RAB36	O95755	333 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	IGHM	P01871	453 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	SEMG1	P04279	462 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	ZNF14	P17017	642 aa	Predicted RBP	13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	CALB2	P22676	271 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	ACVR1B	P36896	505 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	SERPINF1	P36955	418 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	GPR4	P46093	362 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	GIPR	P48546	466 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	PTDSS1	P48651	473 aa	Known RBP	13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	SWI5	Q1ZZU3	235 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	MST1L	Q2TV78	715 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	NRN1L	Q496H8	165 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	IQCC	Q4KMZ1	466 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	FGD3	Q5JSP0	725 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	C10orf128	Q5T292	105 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	FAM205BP	Q63HN1	556 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	DPPA2	Q7Z7J5	298 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	OR4K5	Q8NGD3	323 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	OR52J3	Q8NH60	311 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	FNDC8	Q8TC99	324 aa		13.97	□□□□□ -0.17
LTBP4-218	ENST00000597816	HDAC2	Q92769	488 aa	Known RBP	13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms