RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CPLX4Q7Z7G2 160 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 OFCC1Q8IZS5 231 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF525Q8N782 197 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 C10orf105Q8TEF2 133 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 GEMIN6Q8WXD5 167 aaKnown RBP9.1□□□□□ -0.95
CCDC9-203ENST00000596938 ASB10Q8WXI3 467 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 FAM168AQ92567 244 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 HTRA1Q92743 480 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 MCHR2Q969V1 340 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 FNDC11Q9BVV2 318 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 NSRP1Q9H0G5 558 aaKnown RBP9.1□□□□□ -0.95
CCDC9-203ENST00000596938 SMURF2Q9HAU4 748 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 NOX3Q9HBY0 568 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 MAN2C1Q9NTJ4 1040 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 HIF3AQ9Y2N7 669 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 CMAHPQ9Y471 501 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 SNX13Q9Y5W8 968 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 CSPG4Q6UVK1 2322 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 MCIDASD6RGH6 385 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 NDUFS8O00217 210 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 TLX2O43763 284 aaPredicted RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 CD5LO43866 347 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 PRSS23O95084 383 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 FARS2O95363 451 aaKnown RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 RAB36O95755 333 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF682O95780 498 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 SERPINA1P01009 418 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 TP53P04637 393 aaPredicted RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 IFI30P13284 250 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 GLRXP35754 106 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 YAP1P46937 504 aaKnown RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 PTDSS1P48651 473 aaKnown RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 CLRN1P58418 232 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 PPP2R2BQ00005 443 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 PRKCDQ05655 676 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 ALG10Q5BKT4 473 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 MOSPD2Q8NHP6 518 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 FGFBP3Q8TAT2 258 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 ACOT11Q8WXI4 607 aaPredicted RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 NMD3Q96D46 503 aaKnown RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 MS4A3Q96HJ5 214 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 SORCS2Q96PQ0 1159 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 TNFRSF13CQ96RJ3 184 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF347Q96SE7 839 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 SH3GL3Q99963 347 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 KCTD14Q9BQ13 255 aaPredicted RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 RAB1BQ9H0U4 201 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 TXNIPQ9H3M7 391 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 ANKRD19PQ9H560 264 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 MYOZ1Q9NP98 299 aaPredicted RBP9.09□□□□□ -0.95
CCDC9-203ENST00000596938 RPS6KA6Q9UK32 745 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 FKBP7Q9Y680 259 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 PLCE1Q9P212 2302 aa9.09□□□□□ -0.95
CCDC9-203ENST00000596938 HIVEP2P31629 2446 aa9.09□□□□□ -0.96
CCDC9-203ENST00000596938 NAV3Q8IVL0 2385 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 A0A087WUU8 490 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 LOC390937A0A1W2PQ73 354 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 VWC2LB2RUY7 222 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 INAFM1C9JVW0 142 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 J3KTA2 159 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 hCG_2039718K7EN88 272 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 PTHP01270 115 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 PATE4P0C8F1 98 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 NR2C1P13056 603 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 MAKP20794 623 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FUT4P22083 530 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 PCSK6P29122 969 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 PDLIM4P50479 330 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 ZNF84P51523 738 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 MRPS34P82930 218 aaKnown RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 SNTB2Q13425 540 aaKnown RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FHL1Q13642 323 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 RAB39AQ14964 217 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FXNQ16595 210 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 SLC36A2Q495M3 483 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 THEM4Q5T1C6 240 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 C10orf128Q5T292 105 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 GLYATQ6IB77 296 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 KRT80Q6KB66 452 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 TMPRSS11FQ6ZWK6 438 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 MBOAT2Q6ZWT7 520 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 TSEN54Q7Z6J9 526 aaKnown RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 PIGWQ7Z7B1 504 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 CYP4Z1Q86W10 505 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 ZNF584Q8IVC4 421 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 NRMQ8IXM6 262 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 CDK20Q8IZL9 346 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 LRRC75AQ8NAA5 344 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 SYT14Q8NB59 555 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FAM156AQ8NDB6 213 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 NOXO1Q8NFA2 376 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 OR4K5Q8NGD3 323 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FNDC8Q8TC99 324 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 NEU4Q8WWR8 484 aaPredicted RBP9.08□□□□□ -0.96
CCDC9-203ENST00000596938 FAM162AQ96A26 154 aa9.08□□□□□ -0.96
CCDC9-203ENST00000596938 HSH2DQ96JZ2 352 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms