RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CTLA4P16410 223 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 EGR3Q06889 387 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 PLA2G7Q13093 441 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 PWWP2BQ6NUJ5 590 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 LRRTM1Q86UE6 522 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 PPP1R14AQ96A00 147 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 TMEM106AQ96A25 262 aa20.46■□□□□ 0.87
SRRM1-222ENST00000596378 MRPL22Q9NWU5 206 aaKnown RBP20.46■□□□□ 0.87
SRRM1-222ENST00000596378 GSTZ1O43708 216 aaPredicted RBP20.45■□□□□ 0.87
SRRM1-222ENST00000596378 WNT11O96014 354 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 DHFRP00374 187 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 C1QBP02746 253 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 WDR38Q5JTN6 314 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 BAIAP2L2Q6UXY1 529 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 ANKRD37Q7Z713 158 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 TMPRSS12Q86WS5 348 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 OR52I2Q8NH67 350 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 ELOVL3Q9HB03 270 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 NUBP2Q9Y5Y2 271 aa20.45■□□□□ 0.87
SRRM1-222ENST00000596378 COL6A3P12111 3177 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 FREM3P0C091 2139 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 EXPH5Q8NEV8 1989 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 PLPP3O14495 311 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 DXOO77932 396 aaKnown RBP20.45■□□□□ 0.86
SRRM1-222ENST00000596378 OR6A2O95222 327 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 SYPP08247 313 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 SPARCP09486 303 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 ARRB1P49407 418 aaPredicted RBP20.45■□□□□ 0.86
SRRM1-222ENST00000596378 MAB21L1Q13394 359 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 TMEM71Q6P5X7 295 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 SCMH1Q96GD3 660 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 SLITRK2Q9H156 845 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 GHITMQ9H3K2 345 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 BEX1Q9HBH7 125 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 GTF2A1LQ9UNN4 478 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 RCE1Q9Y256 329 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 HRH3Q9Y5N1 445 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 TMEM14AQ9Y6G1 99 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 PI4KAP42356 2102 aa20.45■□□□□ 0.86
SRRM1-222ENST00000596378 CTDSPLO15194 276 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 HEXBP07686 556 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 TMIGD3P0DMS9 266 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-222ENST00000596378 MAPK3P27361 379 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-222ENST00000596378 ERP29P30040 261 aaKnown RBP20.44■□□□□ 0.86
SRRM1-222ENST00000596378 SNRPD2P62316 118 aaKnown RBP20.44■□□□□ 0.86
SRRM1-222ENST00000596378 SNTB2Q13425 540 aaKnown RBP20.44■□□□□ 0.86
SRRM1-222ENST00000596378 NDUFA5Q16718 116 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 TMEM255AQ5JRV8 349 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 YOD1Q5VVQ6 348 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-222ENST00000596378 MDGA2Q7Z553 956 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 PHF21AQ96BD5 680 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 COMMD4Q9H0A8 199 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 MED28Q9H204 178 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 TXNIPQ9H3M7 391 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 FKBP7Q9Y680 259 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 AKR7A2O43488 359 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 ZNF254O75437 659 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 MPZL1O95297 269 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 AHSA1O95433 338 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 BEST4Q8NFU0 473 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 OR11H7Q8NGC8 314 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 ZFAND1Q8TCF1 268 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 ARL5BQ96KC2 179 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 C4orf45Q96LM5 186 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 KLK11Q9UBX7 282 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 SUSD2Q9UGT4 822 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 SRPK3Q9UPE1 567 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 FOXJ3Q9UPW0 622 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 SLC22A13Q9Y226 551 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 VDAC3Q9Y277 283 aa20.44■□□□□ 0.86
SRRM1-222ENST00000596378 IGLV1-36A0A0B4J1U3 117 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 C7orf66A4D0T2 115 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 SHISA8B8ZZ34 492 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 GMDSO60547 372 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 PTH2RP49190 550 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 NKAIN1Q4KMZ8 207 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 C6orf183Q5T699 404 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 SFRP4Q6FHJ7 346 aaPredicted RBP20.43■□□□□ 0.86
SRRM1-222ENST00000596378 WDFY1Q8IWB7 410 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 NFAM1Q8NET5 270 aaPredicted RBP20.43■□□□□ 0.86
SRRM1-222ENST00000596378 CLDN23Q96B33 292 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 MS4A3Q96HJ5 214 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 CMTM3Q96MX0 182 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 NKX3-1Q99801 234 aaPredicted RBP20.43■□□□□ 0.86
SRRM1-222ENST00000596378 TGIF2Q9GZN2 237 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 MED11Q9P086 117 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 A0A1W2PQM1 296 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 SLC22A23A1A5C7 686 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 PNPP00491 289 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 CDK2P24941 298 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 DHPSP49366 369 aaPredicted RBP20.43■□□□□ 0.86
SRRM1-222ENST00000596378 ARSKQ6UWY0 536 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 DND1Q8IYX4 353 aaKnown RBP20.43■□□□□ 0.86
SRRM1-222ENST00000596378 DCBLD2Q96PD2 775 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 OR8B4Q96RC9 309 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 MNTQ99583 582 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 PRO3102Q9H379 93 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 NKIRAS2Q9NYR9 191 aa20.43■□□□□ 0.86
SRRM1-222ENST00000596378 TRBV5-7A0A0A0MS05 114 aa20.42■□□□□ 0.86
SRRM1-222ENST00000596378 TMEM212A6NML5 194 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms