RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 POLDIP3Q9BY77 421 aaKnown RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 NMNAT2Q9BZQ4 307 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 VSX1Q9NZR4 365 aaPredicted RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 CRIM1Q9NZV1 1036 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 HRNRQ86YZ3 2850 aaPredicted RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 CRYBG3Q68DQ2 2970 aa9.27□□□□□ -0.93
LIG1-210ENST00000596332 ASH1LQ9NR48 2969 aaKnown RBP9.27□□□□□ -0.93
LIG1-210ENST00000596332 TEX13CA0A0J9YWL9 993 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 PRSS37A4D1T9 235 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 OR6C68A6NDL8 312 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 ZNF726A6NNF4 738 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 C16orf97H3BN30 126 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 DHHO43323 396 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 E2F6O75461 281 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 QDPRP09417 244 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 ZNF23P17027 643 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 SLC6A6P31641 620 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 RPL4P36578 427 aaKnown RBP9.26□□□□□ -0.93
LIG1-210ENST00000596332 DAP3P51398 398 aaKnown RBP9.26□□□□□ -0.93
LIG1-210ENST00000596332 CRISP1P54107 249 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 TOP3AQ13472 1001 aaPredicted RBP9.26□□□□□ -0.93
LIG1-210ENST00000596332 TAB1Q15750 504 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 STK11Q15831 433 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 CLEC12AQ5QGZ9 265 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 SLC35F1Q5T1Q4 408 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 GPR139Q6DWJ6 353 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 BHLHA15Q7RTS1 189 aaPredicted RBP9.26□□□□□ -0.93
LIG1-210ENST00000596332 ICA1LQ8NDH6 482 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 NOXO1Q8NFA2 376 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 OR1K1Q8NGR3 316 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 NRG4Q8WWG1 115 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 PTP4A1Q93096 173 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 ZNF566Q969W8 418 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 NABP1Q96AH0 204 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 S100PBPQ96BU1 408 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 TSSK2Q96PF2 358 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 ERMAPQ96PL5 475 aaPredicted RBP9.26□□□□□ -0.93
LIG1-210ENST00000596332 HCAR1Q9BXC0 346 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 HDHD5Q9BXW7 423 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 OR10A4Q9H209 315 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 OCEL1Q9H607 264 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 KRCC1Q9NPI7 259 aaPredicted RBP9.26□□□□□ -0.93
LIG1-210ENST00000596332 B3GNT2Q9NY97 397 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 TAS2R16Q9NYV7 291 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 USE1Q9NZ43 259 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 NPAP1Q9NZP6 1156 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 SLC25A15Q9Y619 301 aa9.26□□□□□ -0.93
LIG1-210ENST00000596332 CENPEQ02224 2701 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 IGLV1-36A0A0B4J1U3 117 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 A0A1W2PPR1 153 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 OR6C65A6NJZ3 312 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 OR5H1A6NKK0 313 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 DEFB108AA8MXU0 73 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 ZNF99A8MXY4 864 aaPredicted RBP9.25□□□□□ -0.93
LIG1-210ENST00000596332 EI24O14681 340 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 CASQ2O14958 399 aaPredicted RBP9.25□□□□□ -0.93
LIG1-210ENST00000596332 ARHGEF9O43307 516 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 IDH3BO43837 385 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 AHCYL1O43865 530 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 MGRN1O60291 552 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 RAD51DO75771 328 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 SEC14L2O76054 403 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 IGHG1P01857 330 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 CTLA4P16410 223 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 CSNK1A1P48729 337 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 KRR1Q13601 381 aaKnown RBP9.25□□□□□ -0.93
LIG1-210ENST00000596332 GINS1Q14691 196 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 PTGES3Q15185 160 aaKnown RBP9.25□□□□□ -0.93
LIG1-210ENST00000596332 RCN1Q15293 331 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 HIKESHIQ53FT3 197 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 C10orf67Q8IYJ2 551 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 OR6V1Q8N148 313 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 UBE2J2Q8N2K1 259 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 CBR4Q8N4T8 237 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 ATG16L2Q8NAA4 619 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 OR4K13Q8NH42 304 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 ZNF570Q96NI8 536 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 NMNAT3Q96T66 252 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 ALG12Q9BV10 488 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 IFT27Q9BW83 186 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 RBM4Q9BWF3 364 aaKnown RBP9.25□□□□□ -0.93
LIG1-210ENST00000596332 ACTR6Q9GZN1 396 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 NOX3Q9HBY0 568 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 SLC25A19Q9HC21 320 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 SLC17A5Q9NRA2 495 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 PAPOLBQ9NRJ5 636 aaKnown RBP9.25□□□□□ -0.93
LIG1-210ENST00000596332 GRHPRQ9UBQ7 328 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 UPB1Q9UBR1 384 aa9.25□□□□□ -0.93
LIG1-210ENST00000596332 A0A1W2PR80 420 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 A6NIZ1 184 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 ZAR1LA6NP61 321 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 ZNF587BE7ETH6 402 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 GPANK1O95872 356 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 PRF1P14222 555 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 NOS3P29474 1203 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 CDAP32320 146 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 RAP1BP61224 184 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 RAP1AP62834 184 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 DAG1Q14118 895 aa9.24□□□□□ -0.93
LIG1-210ENST00000596332 DAZAP2Q15038 168 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms