RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 QDPRP09417 244 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 BMP4P12644 408 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 IFI30P13284 250 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 MAKP20794 623 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 ACVR1BP36896 505 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 SLC9A3P48764 834 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
USE1-207ENST00000596136 IDH3GP51553 393 aaPredicted RBP11.31□□□□□ -0.6
USE1-207ENST00000596136 DGCR6Q14129 220 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 RAB35Q15286 201 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 EFNB3Q15768 340 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 ADIPOQQ15848 244 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 GSG1Q2KHT4 349 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 SPATS1Q496A3 300 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 IQCCQ4KMZ1 466 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 C10orf128Q5T292 105 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 CLEC9AQ6UXN8 241 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 TMPRSS11FQ6ZWK6 438 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 MBOAT2Q6ZWT7 520 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 NRMQ8IXM6 262 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 SLC22A24Q8N4F4 322 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 NOXO1Q8NFA2 376 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
USE1-207ENST00000596136 MCHR2Q969V1 340 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 NMNAT1Q9HAN9 279 aaPredicted RBP11.31□□□□□ -0.6
USE1-207ENST00000596136 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 ADA2Q9NZK5 511 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 NDUFAF4Q9P032 175 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 RHCGQ9UBD6 479 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 FBXL3Q9UKT7 428 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 PMF1-BGLAPU3KQ54 211 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 ABCA1O95477 2261 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
USE1-207ENST00000596136 B9A039 149 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 UBL3O95164 117 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 LY6G6DO95868 133 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 SEMG1P04279 462 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 OR8G3PP0DMU2 310 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 CD79AP11912 226 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 ZNF35P13682 527 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 RHCEP18577 417 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 NR4A1P22736 598 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 SERPINF1P36955 418 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 CAPZA2P47755 286 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 RAB1AP62820 205 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 KRT72Q14CN4 511 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 ALG10Q5BKT4 473 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
USE1-207ENST00000596136 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 CYP4Z1Q86W10 505 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 RBM15BQ8NDT2 890 aaKnown RBP11.3□□□□□ -0.6
USE1-207ENST00000596136 OR10H5Q8NGA6 315 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 SLC7A13Q8TCU3 470 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 DHRS1Q96LJ7 313 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 ZNF347Q96SE7 839 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 CCT8L2Q96SF2 557 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 PLK3Q9H4B4 646 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 SMURF2Q9HAU4 748 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 SAMD4AQ9UPU9 718 aaKnown RBP11.3□□□□□ -0.6
USE1-207ENST00000596136 CR1P17927 2039 aa11.3□□□□□ -0.6
USE1-207ENST00000596136 MCIDASD6RGH6 385 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
USE1-207ENST00000596136 OR4A8P0C604 315 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 HOXB4P17483 251 aaPredicted RBP11.29□□□□□ -0.6
USE1-207ENST00000596136 THBS4P35443 961 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 GIPRP48546 466 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 EFNA4P52798 201 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 CLRN1P58418 232 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 DSCR9P59020 149 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 RPL27P61353 136 aaKnown RBP11.29□□□□□ -0.6
USE1-207ENST00000596136 PIGFQ07326 219 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 NPRL3Q12980 569 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 TBPL2Q6SJ96 375 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 ZNF730Q6ZMV8 503 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 OAFQ86UD1 273 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 CDK20Q8IZL9 346 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 FITM2Q8N6M3 262 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 RNF148Q8N7C7 305 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 SYT14Q8NB59 555 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 HDAC2Q92769 488 aaKnown RBP11.29□□□□□ -0.6
USE1-207ENST00000596136 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 TNFRSF13CQ96RJ3 184 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 CDRT15Q96T59 188 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 FUZQ9BT04 418 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 REG4Q9BYZ8 158 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 NDE1Q9NXR1 346 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 FAM53CQ9NYF3 392 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 MAGEL2Q9UJ55 1249 aa11.29□□□□□ -0.6
USE1-207ENST00000596136 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
USE1-207ENST00000596136 ZNF346Q9UL40 294 aaKnown RBP11.29□□□□□ -0.6
USE1-207ENST00000596136 CHD3Q12873 2000 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 A0A096LNT2 108 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 VSTM5A8MXK1 200 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms