RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 NMD3Q96D46 503 aaKnown RBP13.4□□□□□ -0.26
USE1-206ENST00000595101 Q96M85 177 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 KCNK17Q96T54 332 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 TMEM5Q9Y2B1 443 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 POFUT2Q9Y2G5 429 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 ARPC4-TTLL3A0A0A6YYG9 625 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 DHRS12A0PJE2 317 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 UNC119BA6NIH7 251 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 DHHO43323 396 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 IGHMP01871 453 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 RAP2AP10114 183 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 CDAP32320 146 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 CAPZA2P47755 286 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
USE1-206ENST00000595101 UBE2NP61088 152 aaKnown RBP13.4□□□□□ -0.26
USE1-206ENST00000595101 KEAP1Q14145 624 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 TMEM108Q6UXF1 575 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 FAM122BQ7Z309 247 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 SPATA24Q86W54 205 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 MAGEE2Q8TD90 523 aaPredicted RBP13.4□□□□□ -0.26
USE1-206ENST00000595101 NSMAFQ92636 917 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 SLCO4A1Q96BD0 722 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 B3GAT2Q9NPZ5 323 aa13.4□□□□□ -0.26
USE1-206ENST00000595101 AQP12BA6NM10 295 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 GASTP01350 101 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 RAF1P04049 648 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 ZNF672Q499Z4 452 aaPredicted RBP13.39□□□□□ -0.27
USE1-206ENST00000595101 MESTQ5EB52 335 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 OR2T5Q6IEZ7 315 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 ZNF770Q6IQ21 691 aaPredicted RBP13.39□□□□□ -0.27
USE1-206ENST00000595101 C1orf94Q6P1W5 598 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 B3GLCTQ6Y288 498 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 TMEM179BQ7Z7N9 219 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 MDP1Q86V88 176 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 SKA3Q8IX90 412 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 AQP12AQ8IXF9 295 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 OR2T29Q8NH02 315 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 RASD2Q96D21 266 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 B3GNT2Q9NY97 397 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 TMCC3Q9ULS5 477 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
USE1-206ENST00000595101 TCRBV3S1A0A5B6 114 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 NPIPB13A6NJU9 1138 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 NPIPB4C9JG80 1138 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 HS3ST1O14792 307 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 KRT36O76013 467 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 WNT11O96014 354 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 CD14P08571 375 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 IGFBP1P08833 259 aaPredicted RBP13.38□□□□□ -0.27
USE1-206ENST00000595101 PTAFRP25105 342 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 GSSP48637 474 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 CD47Q08722 323 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 NPRL3Q12980 569 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 ETFDHQ16134 617 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 SLC22A25Q6T423 547 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 ARIH2OSQ8N7S6 290 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 UTP4Q969X6 686 aaKnown RBP13.38□□□□□ -0.27
USE1-206ENST00000595101 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 NRIP3Q9NQ35 241 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 TMEM38BQ9NVV0 291 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 SAMHD1Q9Y3Z3 626 aaKnown RBP13.38□□□□□ -0.27
USE1-206ENST00000595101 IER3IP1Q9Y5U9 82 aa13.38□□□□□ -0.27
USE1-206ENST00000595101 PRRC2AP48634 2157 aaKnown RBP13.38□□□□□ -0.27
USE1-206ENST00000595101 TEX13CA0A0J9YWL9 993 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 E7EQL1 145 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 ATP6V1G2-DDX39BF2Z307 99 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 ARHGEF9O43307 516 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 ATP5HO75947 161 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 NDUFB2O95178 105 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 STAMBPO95630 424 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 CST1P01037 141 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 IGKV3-15P01624 115 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 SOD3P08294 240 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 CECR9P0C854 216 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 CD79AP11912 226 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 FPR3P25089 353 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 PGGHGQ32M88 737 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 SLC22A24Q8N4F4 322 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 ZNF75AQ96N20 296 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 FOXN4Q96NZ1 517 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 SLC38A2Q96QD8 506 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 TRIM15Q9C019 465 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 OR52D1Q9H346 318 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 EGLN3Q9H6Z9 239 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 OBP2BQ9NPH6 170 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 CISD1Q9NZ45 108 aaKnown RBP13.37□□□□□ -0.27
USE1-206ENST00000595101 CRNNQ9UBG3 495 aaPredicted RBP13.37□□□□□ -0.27
USE1-206ENST00000595101 GRHPRQ9UBQ7 328 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 UGT2A1Q9Y4X1 527 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 SCG5P05408 212 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 DNASE1P24855 282 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 CALCRP30988 508 aa13.37□□□□□ -0.27
USE1-206ENST00000595101 RASSF2P50749 326 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms