RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 CHN2P52757 468 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 CRYBA2P53672 197 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 RPS23P62266 143 aaKnown RBP10.52□□□□□ -0.73
VAT1-206ENST00000589709 GALK2Q01415 458 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 RIN1Q13671 783 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 MSMPQ1L6U9 139 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 NRN1LQ496H8 165 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 COQ5Q5HYK3 327 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 NANOGP8Q6NSW7 305 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 UGT2A3Q6UWM9 527 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 HIST3H2AQ7L7L0 130 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 PIGWQ7Z7B1 504 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 CALHM3Q86XJ0 350 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 SLC22A24Q8N4F4 322 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 LRRC17Q8N6Y2 441 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 CCDC197Q8NCU1 140 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 VANGL1Q8TAA9 524 aaPredicted RBP10.52□□□□□ -0.73
VAT1-206ENST00000589709 HIST1H2ACQ93077 130 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 C1orf159Q96HA4 380 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 PRSS27Q9BQR3 290 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
VAT1-206ENST00000589709 MRPL37Q9BZE1 423 aaKnown RBP10.52□□□□□ -0.73
VAT1-206ENST00000589709 POLR2J2Q9GZM3 115 aaKnown RBP10.52□□□□□ -0.73
VAT1-206ENST00000589709 FAM107BQ9H098 131 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 POLR2J3Q9H1A7 115 aaKnown RBP10.52□□□□□ -0.73
VAT1-206ENST00000589709 NANOGQ9H9S0 305 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 FGFR1OP2Q9NVK5 253 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 TMEM38BQ9NVV0 291 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 REV1Q9UBZ9 1251 aa10.52□□□□□ -0.73
VAT1-206ENST00000589709 LRP5LA4QPB2 252 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 EBAG9O00559 213 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 SNX3O60493 162 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 FARS2O95363 451 aaKnown RBP10.51□□□□□ -0.73
VAT1-206ENST00000589709 BCL10O95999 233 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 PGA4P0DJD7 388 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 PGA3P0DJD8 388 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 RBM34P42696 430 aaKnown RBP10.51□□□□□ -0.73
VAT1-206ENST00000589709 RAB39AQ14964 217 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 HIST3H3Q16695 136 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 REP15Q6BDI9 236 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 ZNF584Q8IVC4 421 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 OR8J3Q8NGG0 315 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 FGFBP3Q8TAT2 258 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 LIPHQ8WWY8 451 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 LRRC58Q96CX6 371 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 SEPHS2Q99611 448 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 MRPL13Q9BYD1 178 aaKnown RBP10.51□□□□□ -0.73
VAT1-206ENST00000589709 CHODLQ9H9P2 273 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 MEPEQ9NQ76 525 aaPredicted RBP10.51□□□□□ -0.73
VAT1-206ENST00000589709 SLC7A8Q9UHI5 535 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 BAG5Q9UL15 447 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 ARL2BPQ9Y2Y0 163 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 CUBNO60494 3623 aa10.51□□□□□ -0.73
VAT1-206ENST00000589709 SLC22A23A1A5C7 686 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 FXYD1O00168 92 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 KPNA4O00629 521 aaPredicted RBP10.5□□□□□ -0.73
VAT1-206ENST00000589709 OR5F1O95221 314 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 IFNA14P01570 189 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 IGHG1P01857 330 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 MT-ND1P03886 318 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 QDPRP09417 244 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 PATE4P0C8F1 98 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 THRBP10828 461 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 UMPSP11172 480 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 FUT1P19526 365 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 ZNF133P52736 654 aaPredicted RBP10.5□□□□□ -0.73
VAT1-206ENST00000589709 MRPS11P82912 194 aaKnown RBP10.5□□□□□ -0.73
VAT1-206ENST00000589709 ERICH5Q6P6B1 374 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 NANOGNBQ7Z5D8 188 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 CARM1Q86X55 608 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 LINC01356Q8N9X3 169 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 ELAC2Q9BQ52 826 aaKnown RBP10.5□□□□□ -0.73
VAT1-206ENST00000589709 ECSITQ9BQ95 431 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 SOX7Q9BT81 388 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 C1orf198Q9H425 327 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 ZNF346Q9UL40 294 aaKnown RBP10.5□□□□□ -0.73
VAT1-206ENST00000589709 SH3GLB1Q9Y371 365 aa10.5□□□□□ -0.73
VAT1-206ENST00000589709 A0A1W2PRG6 482 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 HTR3EA5X5Y0 456 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 NPIPB13A6NJU9 1138 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 BBIP1A8MTZ0 92 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 NPIPB4C9JG80 1138 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 BLOC1S5-TXNDC5H3BN57 136 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 SNAP29O95721 258 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 PTHP01270 115 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 TSPAN19P0C672 248 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 APEX1P27695 318 aaKnown RBP10.49□□□□□ -0.73
VAT1-206ENST00000589709 UGT2B15P54855 530 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 CDH15P55291 814 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 TMEM33P57088 247 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 RPL18Q07020 188 aaKnown RBP10.49□□□□□ -0.73
VAT1-206ENST00000589709 MELKQ14680 651 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 ZSCAN26Q16670 478 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 CR1LQ2VPA4 569 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 SLC36A2Q495M3 483 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 RABL3Q5HYI8 236 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 ELFN2Q5R3F8 820 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 TMEM53Q6P2H8 277 aa10.49□□□□□ -0.73
VAT1-206ENST00000589709 ZNF771Q7L3S4 317 aaPredicted RBP10.49□□□□□ -0.73
VAT1-206ENST00000589709 HDDC2Q7Z4H3 204 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms