RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 SLC25A36Q96CQ1 311 aa13.82□□□□□ -0.2
SAFB-205ENST00000588852 LCORQ96JN0 433 aaPredicted RBP13.82□□□□□ -0.2
SAFB-205ENST00000588852 G6PC3Q9BUM1 346 aa13.82□□□□□ -0.2
SAFB-205ENST00000588852 ARL6Q9H0F7 186 aa13.82□□□□□ -0.2
SAFB-205ENST00000588852 SLITRK2Q9H156 845 aa13.82□□□□□ -0.2
SAFB-205ENST00000588852 NXF5Q9H1B4 397 aaKnown RBP13.82□□□□□ -0.2
SAFB-205ENST00000588852 TMEM138Q9NPI0 162 aa13.82□□□□□ -0.2
SAFB-205ENST00000588852 ZNF230Q9UIE0 474 aaPredicted RBP13.82□□□□□ -0.2
SAFB-205ENST00000588852 HIF3AQ9Y2N7 669 aa13.82□□□□□ -0.2
SAFB-205ENST00000588852 PRAMEF2O60811 474 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 IGF2P01344 180 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 CD1AP06126 327 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 NMBP08949 121 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 RAB40ALP0C0E4 278 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 RNH1P13489 461 aaKnown RBP13.81□□□□□ -0.2
SAFB-205ENST00000588852 POU3F4P49335 361 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 SLC36A1Q7Z2H8 476 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 OOSP2Q86WS3 158 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 ZNF615Q8N8J6 731 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 ZNF563Q8TA94 476 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 RAB40AQ8WXH6 277 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 PMM1Q92871 262 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 KLHL15Q96M94 604 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 PNO1Q9NRX1 252 aaKnown RBP13.81□□□□□ -0.2
SAFB-205ENST00000588852 OPN4Q9UHM6 478 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 TEX51A0A1B0GUA7 166 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 TCRBV21S2A2A0A5A6 115 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 CTAG2O75638 210 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 CLPSP04118 112 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 TACSTD2P09758 323 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 CALCBP10092 127 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 LIPCP11150 499 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 GTF2F2P13984 249 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 ALOX5APP20292 161 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 CSRP1P21291 193 aaKnown RBP13.81□□□□□ -0.2
SAFB-205ENST00000588852 FOXL2P58012 376 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 IKZF1Q13422 519 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 OR10K2Q6IF99 312 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 GPAT4Q86UL3 456 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 KDM8Q8N371 416 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 ZBTB44Q8NCP5 570 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 TSEN15Q8WW01 171 aaKnown RBP13.81□□□□□ -0.2
SAFB-205ENST00000588852 RADILQ96JH8 1075 aa13.81□□□□□ -0.2
SAFB-205ENST00000588852 DMDP11532 3685 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 TRBV5-5A0A0J9YX44 114 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 hCG_1807616A0A1W2PRN6 198 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 NAP1L6A6NFF2 107 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 OR2A4O95047 310 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 GIPP09681 153 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 EN2P19622 333 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 SEC61A1P61619 476 aaKnown RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 EIF2B5Q13144 721 aaKnown RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 NKAIN2Q5VXU1 208 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 SPICQ8N5J4 248 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 C19orf47Q8N9M1 422 aaKnown RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 RELL2Q8NC24 303 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 GPBAR1Q8TDU6 330 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 CMTM3Q96MX0 182 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 OR2A7Q96R45 310 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 OR8D2Q9GZM6 311 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 FRYLO94915 3013 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 GGT3PA6NGU5 568 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 XRCC3O43542 346 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 SPDEFO95238 335 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 TNFP01375 233 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 HOXD4P09016 255 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 HOXC4P09017 264 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 CPN1P15169 458 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 SKP2Q13309 424 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 C2orf76Q3KRA6 126 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 ARMC6Q6NXE6 501 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 C17orf107Q6ZR85 190 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 TMUB2Q71RG4 321 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 PRSS42Q7Z5A4 293 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 ADGRG3Q86Y34 549 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 FAM160A2Q8N612 972 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 DEFB119Q8N690 84 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 DUSP19Q8WTR2 217 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.8□□□□□ -0.2
SAFB-205ENST00000588852 PHYHIPQ92561 330 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 GAL3ST4Q96RP7 486 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 ELOVL3Q9HB03 270 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 FBXL3Q9UKT7 428 aa13.8□□□□□ -0.2
SAFB-205ENST00000588852 C17orf105B2RV13 164 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 H7C417 338 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 M0QYG6 137 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 MPZL1O95297 269 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 PTGS2P35354 604 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 LBX1P52954 281 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 SORDQ00796 357 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 SLC6A19Q695T7 634 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 PRSS58Q8IYP2 241 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 LRFN5Q96NI6 719 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 SEMA6CQ9H3T2 930 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 MTFP1Q9UDX5 166 aa13.79□□□□□ -0.2
SAFB-205ENST00000588852 STEAP1Q9UHE8 339 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms