RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SRYQ05066 204 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 FMODQ06828 376 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 SPHARQ15513 63 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 OR2G6Q5TZ20 316 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 HDDC2Q7Z4H3 204 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 CLVS1Q8IUQ0 354 aaPredicted RBP23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 MEIOBQ8N635 442 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 ZIC4Q8N9L1 334 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 OR10H4Q8NGA5 316 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 SNRNP27Q8WVK2 155 aaKnown RBP23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 ROBO4Q8WZ75 1007 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 DGCR14Q96DF8 476 aaKnown RBP23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 TAAR6Q96RI8 345 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 TIMP4Q99727 224 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 RACGAP1Q9H0H5 632 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 RERGLQ9H628 205 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 LDAHQ9H6V9 325 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 INPP5EQ9NRR6 644 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 ETFDHQ16134 617 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 GPR107Q5VW38 600 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 TIGD4Q8IY51 512 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 EXTL1Q92935 676 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 YIPF6Q96EC8 236 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 ABHD17AQ96GS6 310 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 ADAD1Q96M93 576 aaKnown RBP23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 ZNF385AQ96PM9 386 aaKnown RBP23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 TBX5Q99593 518 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 MGLLQ99685 303 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 MARCH7Q9H992 704 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 NPIPA2E9PIF3 369 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 NPIPA3F8WFD2 350 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 IGHG1P01857 330 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 CRABP1P29762 137 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 LIPAP38571 399 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 WNT4P56705 351 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 CLDN17P56750 224 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 ACTC1P68032 377 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 ACTA1P68133 377 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 CAMK2DQ13557 499 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 NOXO1Q8NFA2 376 aa23.16■■□□□ 1.3
SCAMP4-210ENST00000588555 IGKV1D-43A0A0B4J1Z2 117 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 TAF4O00268 1085 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 CYTIPO60759 359 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 GPANK1O95872 356 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 CPN1P15169 458 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 TGFBR2P37173 567 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 GTF2A1P52655 376 aaPredicted RBP23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 HCCSP53701 268 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 ZNF85Q03923 595 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 GALEQ14376 348 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 HIST3H3Q16695 136 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 ARMCX4Q5H9R4 360 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 SIAH3Q8IW03 269 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 SLC35F2Q8IXU6 374 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 OPALINQ96PE5 141 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 FUNDC2Q9BWH2 189 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 NAA50Q9GZZ1 169 aaKnown RBP23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 EXO5Q9H790 373 aa23.15■■□□□ 1.3
SCAMP4-210ENST00000588555 A0A087WV48 116 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 A0A1W2PQL4 384 aaPredicted RBP23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 DAPL1A0PJW8 107 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 C1QTNF9BB2RNN3 333 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 ZZEF1O43149 2961 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 WISP2O76076 250 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 OR2T7P0C7T2 308 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 C1QTNF9P0C862 333 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 RPS3AP61247 264 aaKnown RBP23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 FCRLAQ7L513 359 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 RFLNBQ8N5W9 214 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 OR2T27Q8NH04 317 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 OR52N1Q8NH53 320 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 WDYHV1Q96HA8 205 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 B3GNT3Q9Y2A9 372 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 FLVCR1Q9Y5Y0 555 aa23.14■■□□□ 1.3
SCAMP4-210ENST00000588555 TVP23AA6NH52 213 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF432O94892 652 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 HSMCR30P0CW71 290 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 C3AR1Q16581 482 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 SSX6Q7RTT6 188 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 SLC16A9Q7RTY1 509 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 KLHL36Q8N4N3 616 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 OR2M2Q96R28 347 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 ALG8Q9BVK2 526 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 PAQR5Q9NXK6 330 aaPredicted RBP23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 ING1Q9UK53 422 aaPredicted RBP23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 LHX6Q9UPM6 363 aa23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 CAB39Q9Y376 341 aaPredicted RBP23.14■■□□□ 1.29
SCAMP4-210ENST00000588555 A0A1B0GVC2 190 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 CCDC160A6NGH7 325 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF726A6NNF4 738 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 PTGS2P35354 604 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 CENPAP49450 140 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 CLRN1P58418 232 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 THEM4Q5T1C6 240 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 DNM1P34Q6PK57 102 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF322Q6U7Q0 402 aaPredicted RBP23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 TMEM123Q8N131 208 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF420Q8TAQ5 688 aaPredicted RBP23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 ISOC1Q96CN7 298 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 ARHGAP9Q9BRR9 750 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms