RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 EBF4Q9BQW3 602 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 TEKT3Q9BXF9 490 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 NEUROG2Q9H2A3 272 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 FANCEQ9HB96 536 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 FGF20Q9NP95 211 aaPredicted RBP4.02□□□□□ -1.77
TUBD1-208ENST00000588009 IL26Q9NPH9 171 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 MRPL22Q9NWU5 206 aaKnown RBP4.02□□□□□ -1.77
TUBD1-208ENST00000588009 CD274Q9NZQ7 290 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 LSM7Q9UK45 103 aaKnown RBP4.02□□□□□ -1.77
TUBD1-208ENST00000588009 TIAM1Q13009 1591 aa4.02□□□□□ -1.77
TUBD1-208ENST00000588009 TNS1Q9HBL0 1735 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 MEGF6O75095 1541 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 CLTCQ00610 1675 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ZC3H13Q5T200 1668 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ARPC4-TTLL3A0A0A6YYG9 625 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 RBMY1BA6NDE4 496 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 RBMY1EA6NEQ0 496 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 CHST1O43916 411 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 TIMP1P01033 207 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 CGAP01215 116 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 HSPB1P04792 205 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 RBMY1DP0C7P1 496 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 POLR2MP0CAP2 368 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 RBMY1A1P0DJD3 496 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 MYL2P10916 166 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 PSMB1P20618 241 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 CMA1P23946 247 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 RGRP47804 291 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 DLX1P56177 255 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 IRX3P78415 501 aaPredicted RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 SELENBP1Q13228 472 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ATP6AP1Q15904 470 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 KLHL40Q2TBA0 621 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 TTC19Q6DKK2 380 aaPredicted RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 TWF2Q6IBS0 349 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 REEP3Q6NUK4 255 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 LHFPL3Q86UP9 236 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ZNF100Q8IYN0 542 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 PUSL1Q8N0Z8 303 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 LIX1Q8N485 282 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ZNF321PQ8N8H1 164 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 MARCH1Q8TCQ1 289 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ACOT11Q8WXI4 607 aaPredicted RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 KCTD14Q9BQ13 255 aaPredicted RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 NICN1Q9BSH3 213 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 RIOK2Q9BVS4 552 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ANKRD60Q9BZ19 345 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 POLR2J2Q9GZM3 115 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 POLR2J3Q9H1A7 115 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ELOVL6Q9H5J4 265 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 CWH43Q9H720 699 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 UGT1A10Q9HAW8 530 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 MRPL47Q9HD33 250 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 SH2D2AQ9NP31 389 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 MRPS30Q9NP92 439 aaKnown RBP4.01□□□□□ -1.77
TUBD1-208ENST00000588009 AIG1Q9NVV5 245 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 VNN3Q9NY84 501 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ASF1AQ9Y294 204 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 SETD5Q9C0A6 1442 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 CHD8Q9HCK8 2581 aa4.01□□□□□ -1.77
TUBD1-208ENST00000588009 ATP7AQ04656 1500 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 FAM135AQ9P2D6 1515 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 FAM168BA1KXE4 195 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 SIRPB1O00241 398 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 AGPAT2O15120 278 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 EIF2S2P20042 333 aaKnown RBP4□□□□□ -1.77
TUBD1-208ENST00000588009 TCN1P20061 433 aaPredicted RBP4□□□□□ -1.77
TUBD1-208ENST00000588009 FOXN2P32314 431 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 RORAP35398 523 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 SLC1A1P43005 524 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 VDAC2P45880 294 aaPredicted RBP4□□□□□ -1.77
TUBD1-208ENST00000588009 CDKN1BP46527 198 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 NPBWR2P48146 333 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 SLC11A1P49279 550 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 RIPPLY3P57055 190 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 EIF3EP60228 445 aaKnown RBP4□□□□□ -1.77
TUBD1-208ENST00000588009 PAX5Q02548 391 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 SOHLH1Q5JUK2 328 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 GPR157Q5UAW9 335 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 MMAAQ8IVH4 418 aaKnown RBP4□□□□□ -1.77
TUBD1-208ENST00000588009 GLYATL2Q8WU03 294 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 SGK3Q96BR1 496 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 PRRC1Q96M27 445 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 RARRES2Q99969 163 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 TMEM246Q9BRR3 403 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 EXD2Q9NVH0 621 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 QPCTLQ9NXS2 382 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 CALYQ9NYX4 217 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 PEF1Q9UBV8 284 aaKnown RBP4□□□□□ -1.77
TUBD1-208ENST00000588009 CLEC4EQ9ULY5 219 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 MMP24Q9Y5R2 645 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 DIP2CQ9Y2E4 1556 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 SZT2Q5T011 3432 aa4□□□□□ -1.77
TUBD1-208ENST00000588009 CASZ1Q86V15 1759 aa3.99□□□□□ -1.77
TUBD1-208ENST00000588009 ADGRB2O60241 1585 aa3.99□□□□□ -1.77
TUBD1-208ENST00000588009 KIR2DL5BA0A0G2JN68 375 aa3.99□□□□□ -1.77
TUBD1-208ENST00000588009 KIR2DL5BA0A0G2JPC4 375 aa3.99□□□□□ -1.77
TUBD1-208ENST00000588009 C12orf77C9JDV5 145 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms