RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 IMPA2O14732 288 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 TRMUO75648 421 aaKnown RBP12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 CIB2O75838 187 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 IGLV1-44P01699 117 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 OR8G3PP0DMU2 310 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 CBR1P16152 277 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 RPL4P36578 427 aaKnown RBP12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 GUCA1AP43080 201 aaPredicted RBP12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 GPR4P46093 362 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 CCNIQ14094 377 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 DEFB113Q30KQ7 82 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 HIKESHIQ53FT3 197 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 CARD17Q5XLA6 110 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 OR2T5Q6IEZ7 315 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 C1orf94Q6P1W5 598 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 SMARCD3Q6STE5 483 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 DPY19L2P2Q6ZN68 376 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 ADCK1Q86TW2 530 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 ARIH2OSQ8N7S6 290 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 OR13C2Q8NGS9 318 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 OR2T29Q8NH02 315 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 OR51A7Q8NH64 312 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 MOSPD2Q8NHP6 518 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 GNPDA2Q8TDQ7 276 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 AKAP1Q92667 903 aaKnown RBP eCLIP12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 SLCO4A1Q96BD0 722 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 FAM46AQ96IP4 442 aaKnown RBP12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 SNX18Q96RF0 628 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 CCL19Q99731 98 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 UBTD1Q9HAC8 227 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 VNN3Q9NY84 501 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 GRHPRQ9UBQ7 328 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 APCP25054 2843 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CENPEQ02224 2701 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 UNC119BA6NIH7 251 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 M0R1B8 84 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 TNFRSF11BO00300 401 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CDC42EP2O14613 210 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 IDH3BO43837 385 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 PTP4A3O75365 173 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 PTHP01270 115 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CRYAAP02489 173 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 QDPRP09417 244 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 PAX1P15863 534 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CDH2P19022 906 aaPredicted RBP12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CD53P19397 219 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 GSTM3P21266 225 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 SDHAP31040 664 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 SLC6A6P31641 620 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF83P51522 516 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 IST1P53990 364 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CDH11P55287 796 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CD47Q08722 323 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 PPP1R8Q12972 351 aaKnown RBP12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 GSG1Q2KHT4 349 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 SPNS3Q6ZMD2 512 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 YTHDF3Q7Z739 585 aaKnown RBP12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CLDN22Q8N7P3 220 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 OR4F15Q8NGB8 312 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF519Q8TB69 540 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 TMEM171Q8WVE6 324 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 MCHR2Q969V1 340 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF570Q96NI8 536 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 TNFRSF13CQ96RJ3 184 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CHID1Q9BWS9 393 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 KCNN2Q9H2S1 579 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 NRIP3Q9NQ35 241 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CCM2LQ9NUG4 571 aaPredicted RBP12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 TMEM38BQ9NVV0 291 aa12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF346Q9UL40 294 aaKnown RBP12.06□□□□□ -0.48
PRKCSH-202ENST00000585540 CREBBPQ92793 2442 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 VSTM5A8MXK1 200 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 ARPC3O15145 178 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 FKBP6O75344 327 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 CCNB2O95067 398 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 RAB36O95755 333 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 TXNDC12O95881 172 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 BMP4P12644 408 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 ACVR1BP36896 505 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 GSSP48637 474 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 MRPS34P82930 218 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 LGALS3BPQ08380 585 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 FHL1Q13642 323 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 LAPTM4AQ15012 233 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 SLC36A2Q495M3 483 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 AGAP6Q5VW22 663 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 SHEQ5VZ18 495 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 ALKBH2Q6NS38 261 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 FAM122BQ7Z309 247 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 ZER1Q7Z7L7 766 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 SLC22A24Q8N4F4 322 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 OR4C15Q8NGM1 316 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 FANK1Q8TC84 345 aa12.05□□□□□ -0.48
PRKCSH-202ENST00000585540 NMD3Q96D46 503 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms