RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PCGF3Q3KNV8 242 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 ZNF613Q6PF04 617 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
SDF2-202ENST00000585428 THSD4Q6ZMP0 1018 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 TEX29Q8N6K0 151 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 C10orf53Q8N6V4 93 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 SLC30A7Q8NEW0 376 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 ZNF519Q8TB69 540 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 ZMYND19Q96E35 227 aaPredicted RBP12.34□□□□□ -0.43
SDF2-202ENST00000585428 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
SDF2-202ENST00000585428 TSPAN32Q96QS1 320 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 TMPRSS13Q9BYE2 586 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 IKZF5Q9H5V7 419 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 TCF7L2Q9NQB0 619 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 GPR160Q9UJ42 338 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 LOC105371242A0A075B767 164 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 C11orf98E9PRG8 122 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 DHHO43323 396 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 CDC14BO60729 498 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 SERPINI2O75830 405 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 RGS9O75916 674 aaPredicted RBP12.33□□□□□ -0.44
SDF2-202ENST00000585428 LYPD3O95274 346 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 MPZL1O95297 269 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 SNAP29O95721 258 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 THY1P04216 161 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 FAM157BP0CG42 384 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 CCL2P13500 99 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 LSP1P33241 339 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 RAD52P43351 418 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 KLF3P57682 345 aaPredicted RBP12.33□□□□□ -0.44
SDF2-202ENST00000585428 NCALDP61601 193 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 ACTG1P63261 375 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 MVKQ03426 396 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 SCARB2Q14108 478 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 ZNF74Q16587 644 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 DUSP7Q16829 419 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 NKPD1Q17RQ9 610 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 TMEM154Q6P9G4 183 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
SDF2-202ENST00000585428 ARMC8Q8IUR7 673 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 C11orf40Q8WZ69 217 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 ZNF566Q969W8 418 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 MCHR1Q99705 422 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 SLCO1C1Q9NYB5 712 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 USH1CQ9Y6N9 552 aa12.33□□□□□ -0.44
SDF2-202ENST00000585428 IGHV1-69-2A0A0G2JMI3 117 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 CHP2O43745 196 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 ENTPD5O75356 428 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 ERLIN1O75477 346 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 OR6A2O95222 327 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 CH25HO95992 272 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 QDPRP09417 244 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 PGA4P0DJD7 388 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 PGA3P0DJD8 388 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 LIMS1P48059 325 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 NRN1LQ496H8 165 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 AVPI1Q5T686 147 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 DLEU7Q6UYE1 221 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 C1QL2Q7Z5L3 287 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 LRRC17Q8N6Y2 441 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 SPDL1Q96EA4 605 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 JMJD8Q96S16 334 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 ARHGDIGQ99819 225 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 RBM4Q9BWF3 364 aaKnown RBP12.32□□□□□ -0.44
SDF2-202ENST00000585428 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
SDF2-202ENST00000585428 CCDC167Q9P0B6 97 aa12.32□□□□□ -0.44
SDF2-202ENST00000585428 J3QLI3 93 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 M0QX08 132 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 MGRN1O60291 552 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 TGDSO95455 350 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 PTHP01270 115 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 IGHV3-13P01766 116 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 IGHV2-5P01817 119 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
SDF2-202ENST00000585428 ASAH2BP0C7U1 165 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 AQP1P29972 269 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 IDH3AP50213 366 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 PCBP3P57721 371 aaKnown RBP12.31□□□□□ -0.44
SDF2-202ENST00000585428 TEKQ02763 1124 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 RBBP4Q09028 425 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 NPTX1Q15818 432 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 MOGQ16653 247 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 TUSC1Q2TAM9 212 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 RUNDC3AQ59EK9 446 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 TMEM53Q6P2H8 277 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 PTOV1Q86YD1 416 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 ZDHHC22Q8N966 263 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 CPEB3Q8NE35 698 aaKnown RBP12.31□□□□□ -0.44
SDF2-202ENST00000585428 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 GPR32P1Q8NGA4 272 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 OR4K5Q8NGD3 323 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 OR6T1Q8NGN1 323 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 OR1J2Q8NGS2 313 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms