RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-234	ENST00000584525	ATP5H	O75947	161 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	LY6H	O94772	140 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	GADD45G	O95257	159 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	LYPD3	O95274	346 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	BCL10	O95999	233 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	IGF2	P01344	180 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	NR2C1	P13056	603 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	IGFBP5	P24593	272 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	IFNGR2	P38484	337 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	GZMK	P49863	264 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	SH3BGR	P55822	239 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	BID	P55957	195 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	CLRN1	P58418	232 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ROR2	Q01974	943 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	GGTLC2	Q14390	218 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FAM98B	Q52LJ0	330 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FAM166A	Q6J272	317 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	SLC35D2	Q76EJ3	337 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	C17orf78	Q8N4C9	275 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ZIC4	Q8N9L1	334 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	KCNS3	Q9BQ31	491 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ZNF426	Q9BUY5	554 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	EMC6	Q9BV81	110 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ULBP2	Q9BZM5	246 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	LINC00470	Q9BZP3	86 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MEPE	Q9NQ76	525 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	INIP	Q9NRY2	104 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MED29	Q9NX70	200 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	POFUT2	Q9Y2G5	429 aa		11.44	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	CR1	P17927	2039 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	LOC102725191	A0A1B0GVB3	256 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	SLC35F4	A4IF30	521 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MS4A18	H0YCH9	400 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	TRAF3IP2	O43734	574 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ENTPD5	O75356	428 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	DIRAS1	O95057	198 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	HPR	P00739	348 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	IFNGR1	P15260	489 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	HNF1A	P20823	631 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	RPL4	P36578	427 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	SLC9A3	P48764	834 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	PDLIM4	P50479	330 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	PRPS1	P60891	318 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	CAMK2D	Q13557	499 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	TRIM25	Q14258	630 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MELK	Q14680	651 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	GABRA6	Q16445	453 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	CARTPT	Q16568	116 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MS4A18	Q3C1V0	323 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ALG10	Q5BKT4	473 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FAM120AOS	Q5T036	256 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MBOAT2	Q6ZWT7	520 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	SLC46A3	Q7Z3Q1	461 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	OAF	Q86UD1	273 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ZDHHC21	Q8IVQ6	265 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	LRRC17	Q8N6Y2	441 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	OR52J3	Q8NH60	311 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ZNF566	Q969W8	418 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ASB9	Q96DX5	294 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MUS81	Q96NY9	551 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	BTBD10	Q9BSF8	475 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	TAS2R1	Q9NYW7	299 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	B3GAT1	Q9P2W7	334 aa		11.43	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FZD7	O75084	574 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	UPK3A	O75631	287 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	DNAJC8	O75937	253 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	IGHG1	P01857	330 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ITGA5	P08648	1049 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ASAH2B	P0C7U1	165 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	T-ENOL	P0DO92	83 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	HLA-DOB	P13765	273 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ATP6V1B2	P21281	511 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	APOBEC3A	P31941	199 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	GPR4	P46093	362 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	PRKCD	Q05655	676 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	RPL18	Q07020	188 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ZP4	Q12836	540 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	TOP3A	Q13472	1001 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FLOT2	Q14254	428 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FXN	Q16595	210 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	CEACAM16	Q2WEN9	425 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	ANKDD1A	Q495B1	522 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	LCN8	Q6JVE9	175 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	SPATA24	Q86W54	205 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FAM86B1	Q8N7N1	296 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	MSI2	Q96DH6	328 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FAM46A	Q96IP4	442 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	OR2M2	Q96R28	347 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	PIMREG	Q9BSJ6	248 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	C20orf141	Q9NUB4	165 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	NDUFAF4	Q9P032	175 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FKBP7	Q9Y680	259 aa		11.42	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	FREM1	Q5H8C1	2179 aa		11.41	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525		A0A087WUU8	490 aa		11.41	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525		A0A1W2PRQ8	180 aa		11.41	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	GNGT2	O14610	69 aa		11.41	□□□□□ -0.58
CDK5RAP3-234	ENST00000584525	OR10H3	O60404	316 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms