RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 C3orf62Q6ZUJ4 267 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 RPS27LQ71UM5 84 aaKnown RBP5.25□□□□□ -1.57
NUP85-221ENST00000583548 C16orf62Q7Z3J2 963 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 ZNF584Q8IVC4 421 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 TMEM123Q8N131 208 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 NATD1Q8N6N6 113 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 PNLDC1Q8NA58 520 aaKnown RBP5.25□□□□□ -1.57
NUP85-221ENST00000583548 VPS37AQ8NEZ2 397 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 MFSD8Q8NHS3 518 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 PNPT1Q8TCS8 783 aaKnown RBP5.25□□□□□ -1.57
NUP85-221ENST00000583548 DDB2Q92466 427 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 EGLN2Q96KS0 407 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 SIGLEC11Q96RL6 698 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 ARHGDIGQ99819 225 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 CCT7Q99832 543 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 RHOXF2Q9BQY4 288 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 CHID1Q9BWS9 393 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 ULBP2Q9BZM5 246 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 NPFFR1Q9GZQ6 430 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 FAM234AQ9H0X4 552 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 RRAGDQ9NQL2 400 aaPredicted RBP5.25□□□□□ -1.57
NUP85-221ENST00000583548 GPATCH2Q9NW75 528 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 DCAF16Q9NXF7 216 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 ZNF224Q9NZL3 707 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 EIF3KQ9UBQ5 218 aaKnown RBP5.25□□□□□ -1.57
NUP85-221ENST00000583548 IL19Q9UHD0 177 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 WDR45Q9Y484 360 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 KCNE3Q9Y6H6 103 aa5.25□□□□□ -1.57
NUP85-221ENST00000583548 LOC102725191A0A1B0GVB3 256 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 NPIPB8E9PQR5 432 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 H3BQF6 201 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 EIF3HO15372 352 aaKnown RBP eCLIP5.24□□□□□ -1.57
NUP85-221ENST00000583548 FCMRO60667 390 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 PEX14O75381 377 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 SEC22BO75396 215 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 SEC31AO94979 1220 aaKnown RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 QDPRP09417 244 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 THRBP10828 461 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 PNMTP11086 282 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 MMP9P14780 707 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 EEF1B2P24534 225 aaKnown RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 APLNRP35414 380 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 RPL4P36578 427 aaKnown RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 CRATP43155 626 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 GUCA2AQ02747 115 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 C11orf91Q3C1V1 193 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 SLC36A2Q495M3 483 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 ZNF385BQ569K4 471 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 XKR7Q5GH72 579 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 MTX3Q5HYI7 312 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 MROH9Q5TGP6 573 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 WDR25Q64LD2 544 aaPredicted RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 UNQ9370/PRO34162Q6UXP9 181 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 TRIM46Q7Z4K8 759 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 CALHM3Q86XJ0 350 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 VRK2Q86Y07 508 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 C20orf196Q8IYI0 205 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 ZNF440Q8IYI8 595 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 C1orf87Q8N0U7 546 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 OR6N1Q8NGY5 312 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 PSMA8Q8TAA3 256 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 OR5P2Q8WZ92 322 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 LHX4Q969G2 390 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 CITED2Q99967 270 aaPredicted RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 MRPL57Q9BQC6 102 aaKnown RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 MCRIP2Q9BUT9 160 aaKnown RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 MRPL46Q9H2W6 279 aaKnown RBP5.24□□□□□ -1.57
NUP85-221ENST00000583548 ATAD3AQ9NVI7 634 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 SIGLEC9Q9Y336 463 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 JRKLQ9Y4A0 524 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 TIMM22Q9Y584 194 aa5.24□□□□□ -1.57
NUP85-221ENST00000583548 A0A1B0GVI7 797 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 CFAP73A6NFT4 308 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 LRRC30A6NM36 301 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 A8MT66 165 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 ADARB2-AS1A8MUL3 147 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 AP3D1O14617 1153 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 AIM2O14862 343 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 AKAP10O43572 662 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 OR2T1O43869 369 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 RAMP3O60896 148 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 THY1P04216 161 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 CD28P10747 220 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 CCL2P13500 99 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 TAC1P20366 129 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 AHCYP23526 432 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 CHATP28329 748 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 MAPK1P28482 360 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 HOXD3P31249 432 aaPredicted RBP5.23□□□□□ -1.57
NUP85-221ENST00000583548 HPCAL1P37235 193 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 COPZ1P61923 177 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 HPCAP84074 193 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 DGCR2P98153 550 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 MAPK14Q16539 360 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 ZNF404Q494X3 552 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 TCTEX1D4Q5JR98 221 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 NKAPLQ5M9Q1 402 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 THEM4Q5T1C6 240 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 C5orf46Q6UWT4 87 aa5.23□□□□□ -1.57
NUP85-221ENST00000583548 DCDC5Q6ZRR9 648 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms