RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 ZNF813Q6ZN06 617 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF836Q6ZNA1 936 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 FITM2Q8N6M3 262 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 OR8J3Q8NGG0 315 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 OR52P1PQ8NH57 321 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF75AQ96N20 296 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 OR2M2Q96R28 347 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 SH3GL1Q99961 368 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 PTDSS2Q9BVG9 487 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 IKZF5Q9H5V7 419 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 HINT3Q9NQE9 182 aaKnown RBP10.5□□□□□ -0.73
TOP3A-215ENST00000583328 B3GAT1Q9P2W7 334 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 P2RX2Q9UBL9 471 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 SEC14L4Q9UDX3 406 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 TAGLN3Q9UI15 199 aa10.5□□□□□ -0.73
TOP3A-215ENST00000583328 TMEM247A6NEH6 219 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 C17orf100A8MU93 164 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 FTCDNL1E5RQL4 147 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 AIM2O14862 343 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 TPD52L2O43399 206 aaKnown RBP10.49□□□□□ -0.73
TOP3A-215ENST00000583328 IGHV2-5P01817 119 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 PRG2P13727 222 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 GIPRP48546 466 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 NUDT2P50583 147 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 MTPNP58546 118 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 RAB1AP62820 205 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 IL13RA1P78552 427 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 RAB39AQ14964 217 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 KRT72Q14CN4 511 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 GCNT6Q5T4J0 391 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 RGS7BPQ6MZT1 257 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-215ENST00000583328 NANOGP8Q6NSW7 305 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 ARPINQ7Z6K5 226 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 C20orf196Q8IYI0 205 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 TMEM123Q8N131 208 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 CLIP4Q8N3C7 705 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 SNX33Q8WV41 574 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 DVL3Q92997 716 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-215ENST00000583328 KTI12Q96EK9 354 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-215ENST00000583328 DENND2DQ9H6A0 471 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-215ENST00000583328 NANOGQ9H9S0 305 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 B3GAT2Q9NPZ5 323 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 ARL8BQ9NVJ2 186 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 MED29Q9NX70 200 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 CALML5Q9NZT1 146 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 SLC7A8Q9UHI5 535 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 OPN4Q9UHM6 478 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 WIPI2Q9Y4P8 454 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 WNK2Q9Y3S1 2297 aa10.49□□□□□ -0.73
TOP3A-215ENST00000583328 IGHV1-69-2A0A0G2JMI3 117 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 CLDN25C9JDP6 229 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 M0R082 166 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 OR2T1O43869 369 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 CLPTM1O96005 669 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 FSHBP01225 129 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 CBLP22681 906 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 CRYBB2P43320 205 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 CRISP3P54108 245 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 BAMBIQ13145 260 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 SELPLGQ14242 412 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 MFSD13AQ14CX5 517 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 LARS2Q15031 903 aaKnown RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 PCGF3Q3KNV8 242 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 H1FNTQ75WM6 255 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF771Q7L3S4 317 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 DOK3Q7L591 496 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 TRPM8Q7Z2W7 1104 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 SERPINA11Q86U17 422 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 UEVLDQ8IX04 471 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 C10orf111Q8N326 155 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF417Q8TAU3 575 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 SLC38A5Q8WUX1 472 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 RAB1CQ92928 201 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 TIMD4Q96H15 378 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF587Q96SQ5 575 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 GPA33Q99795 319 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 HOPXQ9BPY8 73 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 EMC6Q9BV81 110 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 SPATA9Q9BWV2 254 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 TMEM38AQ9H6F2 299 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ARMC7Q9H6L4 198 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 KAT8Q9H7Z6 458 aaKnown RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ZMAT3Q9HA38 289 aaKnown RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 CACYBPQ9HB71 228 aaKnown RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 A4GALTQ9NPC4 353 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 DECR2Q9NUI1 292 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 FBXL3Q9UKT7 428 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF232Q9UNY5 417 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF443Q9Y2A4 671 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-215ENST00000583328 AP3M1Q9Y2T2 418 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 DSPPQ9NZW4 1301 aa10.48□□□□□ -0.73
TOP3A-215ENST00000583328 SLC22A23A1A5C7 686 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 DNAJC9-AS1A6NH13 148 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 C5orf58C9J3I9 102 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 TRAF3IP2O43734 574 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-215ENST00000583328 UBL3O95164 117 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 BCHEP06276 602 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 NUDT7P0C024 238 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms