RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 DAG1Q14118 895 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 LRRC36Q1X8D7 754 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 SFRP5Q5T4F7 317 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 KDM4DQ6B0I6 523 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 KLHL24Q6TFL4 600 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 CD300LDQ6UXZ3 194 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
GGA3-216ENST00000583282 OR2T33Q8NG76 320 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 RBM4BQ9BQ04 359 aaKnown RBP12.33□□□□□ -0.44
GGA3-216ENST00000583282 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 C9orf16Q9BUW7 83 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 ALG12Q9BV10 488 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 RBM4Q9BWF3 364 aaKnown RBP12.33□□□□□ -0.44
GGA3-216ENST00000583282 SYT4Q9H2B2 425 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 RERGLQ9H628 205 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
GGA3-216ENST00000583282 PLEKHB1Q9UF11 243 aaPredicted RBP12.33□□□□□ -0.44
GGA3-216ENST00000583282 TMEFF2Q9UIK5 374 aaPredicted RBP12.33□□□□□ -0.44
GGA3-216ENST00000583282 HELZ2Q9BYK8 2649 aaKnown RBP12.33□□□□□ -0.44
GGA3-216ENST00000583282 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 M0R129 80 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 APEHP13798 732 aaKnown RBP12.32□□□□□ -0.44
GGA3-216ENST00000583282 TUBA1BP68363 451 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 TUBA4AP68366 448 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
GGA3-216ENST00000583282 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
GGA3-216ENST00000583282 P2RY6Q15077 328 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 HIKESHIQ53FT3 197 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 TMEM236Q5W0B7 351 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 LPCAT4Q643R3 524 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 TUBA1AQ71U36 451 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 ADCK1Q86TW2 530 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 PARP8Q8N3A8 854 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 CYB561A3Q8NBI2 242 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 OR52N5Q8NH56 324 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 MCHR2Q969V1 340 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 LRR1Q96L50 414 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 FOXN4Q96NZ1 517 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 PSMG3-AS1Q96PY0 264 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 NMNAT3Q96T66 252 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 OSBPL10Q9BXB5 764 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
GGA3-216ENST00000583282 GPR52Q9Y2T5 361 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 ORC6Q9Y5N6 252 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 ICE1Q9Y2F5 2266 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 TENM4Q6N022 2769 aa12.32□□□□□ -0.44
GGA3-216ENST00000583282 SLC22A23A1A5C7 686 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 PRSS37A4D1T9 235 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 TUBAL3A6NHL2 446 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
GGA3-216ENST00000583282 ARPC3O15145 178 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 DHHO43323 396 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 TXNDC12O95881 172 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 RENP00797 406 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 NR2C1P13056 603 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 COX6B1P14854 86 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 CTLA4P16410 223 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 CDKN2AP42771 156 aaKnown RBP12.31□□□□□ -0.44
GGA3-216ENST00000583282 CAPZA2P47755 286 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 ZNF84P51523 738 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 TGFBR3Q03167 851 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 CRMP1Q14194 572 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 GINS1Q14691 196 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 SLC27A4Q6P1M0 643 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 ZNF813Q6ZN06 617 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 STEAP2Q8NFT2 490 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 FOXB1Q99853 325 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 NELFAQ9H3P2 528 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 RPRD1BQ9NQG5 326 aaKnown RBP12.31□□□□□ -0.44
GGA3-216ENST00000583282 CRIM1Q9NZV1 1036 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
GGA3-216ENST00000583282 BAIAP2Q9UQB8 552 aa12.31□□□□□ -0.44
GGA3-216ENST00000583282 RRP15Q9Y3B9 282 aaKnown RBP12.31□□□□□ -0.44
GGA3-216ENST00000583282 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
GGA3-216ENST00000583282 ALPK2Q86TB3 2170 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 FLNCQ14315 2725 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 RIIAD1A6NNX1 92 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 CENPBD1B2RD01 187 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 SLC16A7O60669 478 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 IFNGP01579 166 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 ALPLP05186 524 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 ZNF3P17036 446 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 IGFBP2P18065 325 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 EPHA2P29317 976 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 CDAP32320 146 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 GRK5P34947 590 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 KIR2DL3P43628 341 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 CENPAP49450 140 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 ALDH3A2P51648 485 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 CRISP1P54107 249 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 SH3BGRP55822 239 aaPredicted RBP12.3□□□□□ -0.44
GGA3-216ENST00000583282 GABRA6Q16445 453 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 ZIK1Q3SY52 487 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms