RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NUDT6P53370 316 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 PRPS1P60891 318 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 PLGLB1Q02325 96 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 PMS2P3Q13401 168 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 SNTA1Q13424 505 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 RAB39AQ14964 217 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 LAIR2Q6ISS4 152 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 SLC30A6Q6NXT4 461 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 ARHGAP11AQ6P4F7 1023 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 APOOLQ6UXV4 268 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 GRINAQ7Z429 371 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 MEX3DQ86XN8 651 aaKnown RBP9.15□□□□□ -0.94
SS18-221ENST00000582448 TMEM156Q8N614 296 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 OR51A7Q8NH64 312 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 ZNF420Q8TAQ5 688 aaPredicted RBP9.15□□□□□ -0.94
SS18-221ENST00000582448 ST8SIA1Q92185 356 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 HGDQ93099 445 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 SPACA9Q96E40 222 aaPredicted RBP9.15□□□□□ -0.94
SS18-221ENST00000582448 ARSGQ96EG1 525 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 LRR1Q96L50 414 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 RASL10BQ96S79 203 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 SECISBP2Q96T21 854 aaKnown RBP9.15□□□□□ -0.94
SS18-221ENST00000582448 PLA2G12AQ9BZM1 189 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 UBQLN3Q9H347 655 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 PTGES2Q9H7Z7 377 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 AMBNQ9NP70 447 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 C20orf141Q9NUB4 165 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 ALKBH4Q9NXW9 302 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 AASSQ9UDR5 926 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 ST6GALNAC2Q9UJ37 374 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 NF1P21359 2839 aa9.15□□□□□ -0.94
SS18-221ENST00000582448 INTS1Q8N201 2190 aaKnown RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 TMEM200CA6NKL6 621 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 FAM166BA8MTA8 275 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ZNF701M0R085 212 aaPredicted RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 M0R129 80 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 CDC42EP2O14613 210 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 SURF4O15260 269 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 PRKYO43930 277 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 TRMUO75648 421 aaKnown RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 OR7A10O76100 309 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 NTN1O95631 604 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 FADS2O95864 444 aaKnown RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 CH25HO95992 272 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 MT-ND2P03891 347 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 CELA3BP08861 270 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ZNF3P17036 446 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 MYL12AP19105 171 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 HK1P19367 917 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 DNASE1P24855 282 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 MAP2K6P52564 334 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 PPIAP62937 165 aaKnown RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 PIGFQ07326 219 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ST3GAL4Q11206 333 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 C1DQ13901 141 aaKnown RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 QPRTQ15274 297 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 NTRK2Q16620 822 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 GXYLT1Q4G148 440 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ACSM5Q6NUN0 579 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 MDGA2Q7Z553 956 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 NANOGNBQ7Z5D8 188 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 OR8D4Q8NGM9 314 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 GGHQ92820 318 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 NINJ1Q92982 152 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 MUL1Q969V5 352 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 OTULINQ96BN8 352 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 DTNBP1Q96EV8 351 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 TMEM80Q96HE8 168 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 KRTAP9-3Q9BYQ3 159 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 CXXC4Q9H2H0 198 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 FN3KQ9H479 309 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 MEPEQ9NQ76 525 aaPredicted RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 NANSQ9NR45 359 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 SERINC1Q9NRX5 453 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 DNAJC27Q9NZQ0 273 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 SIGLEC7Q9Y286 467 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 SLC6A5Q9Y345 797 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 SPIN1Q9Y657 262 aaPredicted RBP9.14□□□□□ -0.95
SS18-221ENST00000582448 SPG11Q96JI7 2443 aa9.14□□□□□ -0.95
SS18-221ENST00000582448 ZNF469Q96JG9 3925 aaPredicted RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 TRAV36DV7A0A075B6V5 113 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 TRAV27A0A087WT01 109 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 TMED7-TICAM2A0A0A6YYA0 188 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 A8MVM7 634 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 PRR23D1E9PI22 279 aaPredicted RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 H3BSA7 217 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 IDH3BO43837 385 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 OR2T1O43869 369 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 PTP4A3O75365 173 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 CTAG2O75638 210 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 AHSA1O95433 338 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 MT-ATP6P00846 226 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms