RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FAM25GB3EWG6 89 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 TLE3Q04726 772 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 HSD17B12Q53GQ0 312 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 FAM27D1Q5T7N8 215 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 UNQ9370/PRO34162Q6UXP9 181 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 LRRC28Q86X40 367 aaPredicted RBP20.37■□□□□ 0.85
CCDC47-204ENST00000582252 DRAXINQ8NBI3 349 aaPredicted RBP20.37■□□□□ 0.85
CCDC47-204ENST00000582252 ADAMTS14Q8WXS8 1223 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 C5orf34Q96MH7 638 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 SPRY4Q9C004 299 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 PPIL3Q9H2H8 161 aaKnown RBP20.37■□□□□ 0.85
CCDC47-204ENST00000582252 TIGARQ9NQ88 270 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 IKZF2Q9UKS7 526 aa20.37■□□□□ 0.85
CCDC47-204ENST00000582252 SLC22A23A1A5C7 686 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 AKR7A3O95154 331 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 OR8G3PP0DMU2 310 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ALOX5APP20292 161 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ADH6P28332 368 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 TALDO1P37837 337 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 RANBP1P43487 201 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 SSR4P51571 173 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 RIN1Q13671 783 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ALKBH1Q13686 389 aaKnown RBP20.36■□□□□ 0.85
CCDC47-204ENST00000582252 FADS6Q8N9I5 356 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 OR13C5Q8NGS8 318 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 OTOSQ8NHW6 89 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 SLC25A43Q8WUT9 341 aaPredicted RBP20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ARL5BQ96KC2 179 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 FANCFQ9NPI8 374 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 MRM2Q9UI43 246 aaKnown RBP20.36■□□□□ 0.85
CCDC47-204ENST00000582252 CHCHD2Q9Y6H1 151 aaPredicted RBP20.36■□□□□ 0.85
CCDC47-204ENST00000582252 CFAP54Q96N23 3096 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 A0A087WZY1 265 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 LIPT2A6NK58 231 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 B4DXG7 233 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 MS4A18H0YCH9 400 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 PDCD5O14737 125 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 SLC16A7O60669 478 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 FZD7O75084 574 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 TMEM127O75204 238 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ZNF432O94892 652 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 TNFSF15O95150 251 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 MAPK3P27361 379 aaPredicted RBP20.36■□□□□ 0.85
CCDC47-204ENST00000582252 BAK1Q16611 211 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 MS4A18Q3C1V0 323 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 DPY19L4Q7Z388 723 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ADPRHL1Q8NDY3 354 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 OR11G2Q8NGC1 345 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 THEM6Q8WUY1 208 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ASB10Q8WXI3 467 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 ZBTB8AQ96BR9 441 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 UBL7Q96S82 380 aaPredicted RBP20.36■□□□□ 0.85
CCDC47-204ENST00000582252 SOSTQ9BQB4 213 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 FOXJ2Q9P0K8 574 aa20.36■□□□□ 0.85
CCDC47-204ENST00000582252 IGLV1-36A0A0B4J1U3 117 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 ANKRD61A6NGH8 418 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 NOTOA8MTQ0 251 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 ICAM2P13598 275 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 RPS11P62280 158 aaKnown RBP eCLIP20.35■□□□□ 0.85
CCDC47-204ENST00000582252 GLO1Q04760 184 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 IL18Q14116 193 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 MELKQ14680 651 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 LIPNQ5VXI9 398 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 ZNF544Q6NX49 715 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 IL20RBQ6UXL0 311 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 ESX1Q8N693 406 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 THRSPQ92748 146 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 FRMD6Q96NE9 622 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 NPAS1Q99742 590 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 PDCD1LG2Q9BQ51 273 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 ABRACLQ9P1F3 81 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 KLHDC2Q9Y2U9 406 aa20.35■□□□□ 0.85
CCDC47-204ENST00000582252 A0A1W2PNV4 684 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 H3BML4 177 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 PSMD9O00233 223 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 UPK3AO75631 287 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 ABHD16AO95870 558 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 RAB40ALP0C0E4 278 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 IMPDH2P12268 514 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 SELENBP1Q13228 472 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 TRIQKQ629K1 86 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 SLC18B1Q6NT16 456 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 TIPARPQ7Z3E1 657 aaKnown RBP20.34■□□□□ 0.85
CCDC47-204ENST00000582252 NR2C2APQ86WQ0 139 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 OR5AK2Q8NH90 309 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 POC1BQ8TC44 478 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 OR14A2Q96R54 314 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 COMMD4Q9H0A8 199 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 TBC1D24Q9ULP9 559 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 RASD1Q9Y272 281 aa20.34■□□□□ 0.85
CCDC47-204ENST00000582252 ARPC4-TTLL3A0A0A6YYG9 625 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 A0A0G2JK05 382 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 A0A1W2PQ09 198 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 SEC14L5O43304 696 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 RPP14O95059 124 aaKnown RBP20.33■□□□□ 0.85
CCDC47-204ENST00000582252 CSF3P09919 207 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 IL11P20809 199 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 HSF1Q00613 529 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 RASGEF1BQ0VAM2 473 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 ASAH1Q13510 395 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms