RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ZNF75A	Q96N20	296 aa		10.91	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	KCTD14	Q9BQ13	255 aa	Predicted RBP	10.91	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	C20orf141	Q9NUB4	165 aa		10.91	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	TMEM38B	Q9NVV0	291 aa		10.91	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	JMJD1C	Q15652	2540 aa		10.91	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	SLC22A23	A1A5C7	686 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ZNF503-AS2	A6NEH8	195 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	TLX2	O43763	284 aa	Predicted RBP	10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	SHOX2	O60902	331 aa	Predicted RBP	10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	GMNN	O75496	209 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ZNF682	O95780	498 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	SERPINA5	P05154	406 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	QDPR	P09417	244 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ZNF35	P13682	527 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	B4GALT1	P15291	398 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ACADS	P16219	412 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	DRD4	P21917	467 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	SEC24C	P53992	1094 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	PSME3	P61289	254 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	PPP2R2B	Q00005	443 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	PRKCD	Q05655	676 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	LOXL1	Q08397	574 aa	Predicted RBP	10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	SLC36A2	Q495M3	483 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	C10orf128	Q5T292	105 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ARMC4	Q5T2S8	1044 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	FKBP9P1	Q75LS8	142 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	WDFY1	Q8IWB7	410 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	NOXO1	Q8NFA2	376 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	PFN4	Q8NHR9	129 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ASB10	Q8WXI3	467 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	FAM168A	Q92567	244 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	NDEL1	Q9GZM8	345 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	RAB1B	Q9H0U4	201 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	TXNIP	Q9H3M7	391 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	NOX3	Q9HBY0	568 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	ZNF224	Q9NZL3	707 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	SAMD4A	Q9UPU9	718 aa	Known RBP	10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	TMEM5	Q9Y2B1	443 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708	CMAHP	Q9Y471	501 aa		10.9	□□□□□ -0.66
CDK5RAP3-222	ENST00000581708		A0A1W2PRQ8	180 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708		A6NIZ1	184 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	AHCYL1	O43865	530 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	TRMU	O75648	421 aa	Known RBP	10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SEC14L2	O76054	403 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SERPINA1	P01009	418 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	IGHM	P01871	453 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CELA3B	P08861	270 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	IFI30	P13284	250 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	THBS4	P35443	961 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GLRX	P35754	106 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	AQP2	P41181	271 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GIPR	P48546	466 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PTDSS1	P48651	473 aa	Known RBP	10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RAP1B	P61224	184 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RAP1A	P62834	184 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MRPS34	P82930	218 aa	Known RBP	10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	DGCR6	Q14129	220 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MELK	Q14680	651 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FXN	Q16595	210 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ALG10	Q5BKT4	473 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	THEM4	Q5T1C6	240 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	TMEM53	Q6P2H8	277 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	TMPRSS11F	Q6ZWK6	438 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MBOAT2	Q6ZWT7	520 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RRM2B	Q7LG56	351 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	VTCN1	Q7Z7D3	282 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SKA3	Q8IX90	412 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ZNF540	Q8NDQ6	660 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	OR1J2	Q8NGS2	313 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	C10orf105	Q8TEF2	133 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NEU4	Q8WWR8	484 aa	Predicted RBP	10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MCHR2	Q969V1	340 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FAM162A	Q96A26	154 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	HSH2D	Q96JZ2	352 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	DOK1	Q99704	481 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ALG12	Q9BV10	488 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GORASP2	Q9H8Y8	452 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SEC61A2	Q9H9S3	476 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SIAE	Q9HAT2	523 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MAN2C1	Q9NTJ4	1040 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NDE1	Q9NXR1	346 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ARL2BP	Q9Y2Y0	163 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FAM32A	Q9Y421	112 aa	Known RBP	10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ENPP4	Q9Y6X5	453 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ABCA1	O95477	2261 aa		10.89	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	IGHV4-30-2	A0A087WSY4	118 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708		A0A096LNT2	108 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	LOC390937	A0A1W2PQ73	354 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	hCG_2039718	K7EN88	272 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FFAR1	O14842	300 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CD5L	O43866	347 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	DCTN3	O75935	186 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PRSS23	O95084	383 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SNAP29	O95721	258 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	F13B	P05160	661 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SAG	P10523	405 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PDLIM4	P50479	330 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MNAT1	P51948	309 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RPL27	P61353	136 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GALK2	Q01415	458 aa		10.88	□□□□□ -0.67

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