RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ASPNQ9BXN1 380 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 BCL2L14Q9BZR8 327 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 C1orf198Q9H425 327 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 BEX1Q9HBH7 125 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 KLHL14Q9P2G3 628 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 POLR3KQ9Y2Y1 108 aaPredicted RBP10.77□□□□□ -0.69
SS18-219ENST00000581570 INSIG2Q9Y5U4 225 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 IGKV1D-42A0A075B6H8 117 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 A0A0G2JPF8 293 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 HNRNPCL2B2RXH8 293 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 HNRNPCL3B7ZW38 293 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 TIMM23O14925 209 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 ENTPD5O75356 428 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 SPAG7O75391 227 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 SERPINI2O75830 405 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 ALX3O95076 343 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 SNAP29O95721 258 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 PTHP01270 115 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 HNRNPCL4P0DMR1 293 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 AHCYP23526 432 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 CRATP43155 626 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 PUDPQ08623 228 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 LRRC74AQ0VAA2 488 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 PMS2P3Q13401 168 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 PDCD4Q53EL6 469 aaKnown RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 FBLN7Q53RD9 439 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 ZNF362Q5T0B9 420 aaPredicted RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 BRICD5Q6PL45 260 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 SCAIQ8N9R8 606 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 CPEB3Q8NE35 698 aaKnown RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 OR52E2Q8NGJ4 325 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 OR1J1Q8NGS3 322 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 OR6S1Q8NH40 331 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 TCP10LQ8TDR4 215 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 ANP32BQ92688 251 aaKnown RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 SLC35B4Q969S0 331 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 TMEM19Q96HH6 336 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 TEX37Q96LM6 180 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 OR52E6Q96RD3 313 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 DCLRE1CQ96SD1 692 aaKnown RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 CITED1Q99966 193 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 EGLN1Q9GZT9 426 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 LRMDAQ9H2I8 198 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 TCF7L2Q9NQB0 619 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 GLTPQ9NZD2 209 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 EGFL7Q9UHF1 273 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 GPR45Q9Y5Y3 372 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 NPTNQ9Y639 398 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 SOX21Q9Y651 276 aaPredicted RBP10.76□□□□□ -0.69
SS18-219ENST00000581570 ARHGAP32A7KAX9 2087 aa10.76□□□□□ -0.69
SS18-219ENST00000581570 A0A1B0GWA3 101 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 TLDC2A0PJX2 215 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 TMEM247A6NEH6 219 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 TM9SF1O15321 606 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 MFN2O95140 757 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 FARS2O95363 451 aaKnown RBP10.75□□□□□ -0.69
SS18-219ENST00000581570 BGLAPP02818 100 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 CRYBA1P05813 215 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 BPGMP07738 259 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 LBPP18428 481 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 MVDP53602 400 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 BIDP55957 195 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 DSTNP60981 165 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 UFM1P61960 85 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 PLP2Q04941 152 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 ALG10BQ5I7T1 473 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 OLFML2AQ68BL7 652 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 WDR88Q6ZMY6 472 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 C9orf139Q6ZV77 190 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 RHOUQ7L0Q8 258 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 PXKQ7Z7A4 578 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 C1QL4Q86Z23 238 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 ZNF781Q8N8C0 355 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 LSMEM1Q8N8F7 131 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 OR4F5Q8NH21 305 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 DNAJA4Q8WW22 397 aaPredicted RBP10.75□□□□□ -0.69
SS18-219ENST00000581570 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 UBE2FQ969M7 185 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 DIRC2Q96SL1 478 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 EPYCQ99645 322 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 PATZ1Q9HBE1 687 aaKnown RBP10.75□□□□□ -0.69
SS18-219ENST00000581570 NPHS2Q9NP85 383 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 TMEM38BQ9NVV0 291 aa10.75□□□□□ -0.69
SS18-219ENST00000581570 IQCMA0A1B0GVH7 501 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 PLSCR5A0PG75 271 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 PLPP3O14495 311 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 RFXANKO14593 260 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
SS18-219ENST00000581570 ITM2AO43736 263 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 IGHV2-70P01814 119 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 MYZAPP0CAP1 466 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 IGHV4-38-2P0DP08 117 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 IL12AP29459 219 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 SLC6A9P48067 706 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 MMP15P51511 669 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 RAG2P55895 527 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 PAX8Q06710 450 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms