RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 OR6T1Q8NGN1 323 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 OR51F2Q8NH61 342 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 ZNF566Q969W8 418 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 SLC25A44Q96H78 314 aaPredicted RBP9.07□□□□□ -0.96
RFFL-209ENST00000581265 ARHGDIGQ99819 225 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 TMEM38BQ9NVV0 291 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 NKIRAS2Q9NYR9 191 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 GPR160Q9UJ42 338 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 FZR1Q9UM11 496 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 GRIP1Q9Y3R0 1128 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 TENM1Q9UKZ4 2725 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 WNK2Q9Y3S1 2297 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 TRAV20A0A0B4J274 112 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 A0A1W2PPW3 197 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 C17orf100A8MU93 164 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 C11orf98E9PRG8 122 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 M0R3H8 397 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 PPIHO43447 177 aaKnown RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 MGRN1O60291 552 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ZNF500O60304 480 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 FARS2O95363 451 aaKnown RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 SNAP29O95721 258 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 CH25HO95992 272 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 CLPTM1O96005 669 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 PTHP01270 115 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 THY1P04216 161 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ASAH2BP0C7U1 165 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 PGA4P0DJD7 388 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 PGA3P0DJD8 388 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ANPEPP15144 967 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 CRYBB2P43320 205 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 RAD52P43351 418 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ATP4BP51164 291 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 MYBPC1Q00872 1141 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 NPTX1Q15818 432 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 HIST3H3Q16695 136 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 PCGF3Q3KNV8 242 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 AGKQ53H12 422 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ENTPD8Q5MY95 495 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 RGS7BPQ6MZT1 257 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 TTC33Q6PID6 262 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 PAQR4Q8N4S7 273 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 LRRC17Q8N6Y2 441 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 SLC30A7Q8NEW0 376 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 SEMA6DQ8NFY4 1073 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 GPR32P1Q8NGA4 272 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ZNF519Q8TB69 540 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ADAMTS16Q8TE57 1224 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 GCDHQ92947 438 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 MPP4Q96JB8 637 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 LRRC37BQ96QE4 947 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 SH3GL3Q99963 347 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 CPPED1Q9BRF8 314 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 ZNF426Q9BUY5 554 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 SLC19A3Q9BZV2 496 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 C1orf198Q9H425 327 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 NARFLQ9H6Q4 476 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 SLCO1B3Q9NPD5 702 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 NANSQ9NR45 359 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 SLCO1C1Q9NYB5 712 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 TAAR3PQ9P1P4 343 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.06□□□□□ -0.96
RFFL-209ENST00000581265 ZNF229Q9UJW7 825 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 ANGPT4Q9Y264 503 aa9.06□□□□□ -0.96
RFFL-209ENST00000581265 TRAPPC13A5PLN9 417 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 RNF13O43567 381 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 BCL10O95999 233 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 HIST1H2ABP04908 130 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 QDPRP09417 244 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 CCL2P13500 99 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 MAGEB1P43366 347 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 COMPP49747 757 aaPredicted RBP9.05□□□□□ -0.96
RFFL-209ENST00000581265 UCP2P55851 309 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 KLF3P57682 345 aaPredicted RBP9.05□□□□□ -0.96
RFFL-209ENST00000581265 CCL8P80075 99 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 MOGQ16653 247 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 NKPD1Q17RQ9 610 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 SLC36A2Q495M3 483 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 TMEM53Q6P2H8 277 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 FAHD2BQ6P2I3 314 aaPredicted RBP9.05□□□□□ -0.96
RFFL-209ENST00000581265 TMEM154Q6P9G4 183 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 C1orf229Q6ZS94 237 aaPredicted RBP9.05□□□□□ -0.96
RFFL-209ENST00000581265 USP43Q70EL4 1123 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 HIST3H2AQ7L7L0 130 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 RBM45Q8IUH3 476 aaKnown RBP9.05□□□□□ -0.96
RFFL-209ENST00000581265 DPP10Q8N608 796 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 OR4K5Q8NGD3 323 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 OR4D11Q8NGI4 311 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 OR1J2Q8NGS2 313 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 SYNPRQ8TBG9 265 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 ZNF418Q8TF45 676 aaPredicted RBP9.05□□□□□ -0.96
RFFL-209ENST00000581265 C11orf40Q8WZ69 217 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 HIST1H2ACQ93077 130 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 FAHD2AQ96GK7 314 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 SEPHS2Q99611 448 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 MRPL13Q9BYD1 178 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms