RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 EEF1E1O43324 174 aaKnown RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 CGAP01215 116 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 QDPRP09417 244 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 PRR23D2P0DMB1 279 aaPredicted RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 PCYT1AP49585 367 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 BLVRAP53004 296 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 LGALS3BPQ08380 585 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 HIST3H3Q16695 136 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 TMEM236Q5W0B7 351 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 LEG1Q6P5S2 330 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 PTCHD4Q6ZW05 846 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 LSRQ86X29 649 aaPredicted RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 CCDC71Q8IV32 467 aaPredicted RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 IQCF1Q8N6M8 205 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 ZNF610Q8N9Z0 462 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 SYT14Q8NB59 555 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 OR8J1Q8NGP2 316 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 OR2T4Q8NH00 348 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 OR4Q3Q8NH05 313 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 HDAC2Q92769 488 aaKnown RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 NMNAT3Q96T66 252 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 Q9H521 79 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 VSX1Q9NZR4 365 aaPredicted RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 NDRG4Q9ULP0 352 aaKnown RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 A8MXE2 369 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 MPGP29372 298 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 NTF4P34130 210 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 GGT2P36268 569 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
SKA2-205ENST00000580541 CAPGP40121 348 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 CDKN2AP42771 156 aaKnown RBP12.62□□□□□ -0.39
SKA2-205ENST00000580541 ADORA2A-AS1P86434 159 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 FAPQ12884 760 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 MESTQ5EB52 335 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 C1QTNF12Q5T7M4 302 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 TSPO2Q5TGU0 170 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 C12orf73Q69YU5 71 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 NPEPL1Q8NDH3 523 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 MCHR2Q969V1 340 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 OTULINQ96BN8 352 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 Q96MT0 163 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 ADI1Q9BV57 179 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 RBM24Q9BX46 236 aaKnown RBP12.62□□□□□ -0.39
SKA2-205ENST00000580541 CRLF2Q9HC73 371 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 MALT1Q9UDY8 824 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 MOKQ9UQ07 419 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 FKBP7Q9Y680 259 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 HSPE1-MOB4S4R3N1 261 aa12.62□□□□□ -0.39
SKA2-205ENST00000580541 ZNF462Q96JM2 2506 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 DHHO43323 396 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 TLX2O43763 284 aaPredicted RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 SLC16A7O60669 478 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 KHDRBS3O75525 346 aaKnown RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 UPK3AO75631 287 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 AGFG2O95081 481 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 NPR2P20594 1047 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 PAX7P23759 505 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 EPHA2P29317 976 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 PEX19P40855 299 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 ASCL1P50553 236 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 ZNF133P52736 654 aaPredicted RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 SLC25A1P53007 311 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 ROR2Q01974 943 aaKnown RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 RUNX1T1Q06455 604 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 MEDAGQ5VYS4 303 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 IZUMO2Q6UXV1 221 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 LUZP2Q86TE4 346 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 CCDC36Q8IYA8 594 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 FAM81AQ8TBF8 368 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 RFKQ969G6 155 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 MBOAT4Q96T53 435 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 PITX2Q99697 317 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 KCNN2Q9H2S1 579 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 TAS2R16Q9NYV7 291 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 JKAMPQ9P055 326 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 FREM1Q5H8C1 2179 aa12.61□□□□□ -0.39
SKA2-205ENST00000580541 SPENQ96T58 3664 aaKnown RBP12.61□□□□□ -0.39
SKA2-205ENST00000580541 SMG1Q96Q15 3661 aaKnown RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 CIB4A0PJX0 185 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 DLGAP1O14490 977 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 FARS2O95363 451 aaKnown RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 CLDN14O95500 239 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 HOXB1P14653 301 aaPredicted RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 AQP4P55087 323 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 GLO1Q04760 184 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 CRMP1Q14194 572 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms