RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 BPESC1Q9GZL8 116 aa12.49□□□□□ -0.41
SMARCE1-216ENST00000580419 MEPEQ9NQ76 525 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-216ENST00000580419 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
SMARCE1-216ENST00000580419 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF346Q9UL40 294 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-216ENST00000580419 RNF13O43567 381 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 LILRA1O75019 489 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 BCL10O95999 233 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 OPN1SWP03999 348 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 CD79AP11912 226 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 PCMT1P22061 227 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 GIPRP48546 466 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 DAP3P51398 398 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 TMEM33P57088 247 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 GALK2Q01415 458 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 CARD17Q5XLA6 110 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 VHLLQ6RSH7 139 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 TSPYL5Q86VY4 417 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 RBM45Q8IUH3 476 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 SVOPLQ8N434 492 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 ANKS4BQ8N8V4 417 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 OR1J2Q8NGS2 313 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF583Q96ND8 569 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 CCDC134Q9H6E4 229 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 CHODLQ9H9P2 273 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
SMARCE1-216ENST00000580419 IGLV3-9A0A075B6K5 115 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 ICMTO60725 284 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF250P15622 560 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 IGFBP5P24593 272 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 PTDSS1P48651 473 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 MOGQ16653 247 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 UNQ6126/PRO20091Q6UXV3 157 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 ARPINQ7Z6K5 226 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 CARM1Q86X55 608 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 WDFY1Q8IWB7 410 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 WACQ9BTA9 647 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 TMEM120AQ9BXJ8 343 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 MRPL37Q9BZE1 423 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 SAR1AQ9NR31 198 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 REV1Q9UBZ9 1251 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 RIMS3Q9UJD0 308 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 WNK2Q9Y3S1 2297 aa12.47□□□□□ -0.41
SMARCE1-216ENST00000580419 ANK2Q01484 3957 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 FAM220BPB1ANY3 271 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 C11orf98E9PRG8 122 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 SEC14L2O76054 403 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 OR7A10O76100 309 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 ADRA2AP08913 450 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 QDPRP09417 244 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 SRD5A1P18405 259 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 FUT1P19526 365 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 ACHEP22303 614 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 IFNA8P32881 189 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 RAD52P43351 418 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF84P51523 738 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 UGT2B15P54855 530 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 SELENOVP59797 346 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 SELENOWP63302 87 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 MRPS34P82930 218 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 RPL18Q07020 188 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 KLF10Q13118 480 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 PCGF3Q3KNV8 242 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 IQCCQ4KMZ1 466 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 RABL3Q5HYI8 236 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 FAM120AOSQ5T036 256 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 FAM205BPQ63HN1 556 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 KRT80Q6KB66 452 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 CDK20Q8IZL9 346 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 LRRC17Q8N6Y2 441 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 LINC01356Q8N9X3 169 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 NOXO1Q8NFA2 376 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 ZNF519Q8TB69 540 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 TMEM239Q8WW34 195 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 ASB10Q8WXI3 467 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 RDH5Q92781 318 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 LRMDAQ9H2I8 198 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 SIAEQ9HAT2 523 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 HIF3AQ9Y2N7 669 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms