RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CELA3AP09093 270 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ASAH2BP0C7U1 165 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ADORA3P0DMS8 318 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CD36P16671 472 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CNR1P21554 472 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 AQP2P41181 271 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 MAGEA5P43359 124 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CAPZA2P47755 286 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CLK1P49759 484 aaKnown RBP9.08□□□□□ -0.96
SS18-210ENST00000578700 DSCR4P56555 118 aaPredicted RBP9.08□□□□□ -0.96
SS18-210ENST00000578700 CTXN1P60606 82 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ERVK-25P63136 954 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ACTC1P68032 377 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ACTA1P68133 377 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 EGR4Q05215 589 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 FOXF1Q12946 379 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CRMP1Q14194 572 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 IRF3Q14653 427 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SLC10A1Q14973 349 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 PON3Q15166 354 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SPHARQ15513 63 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SGCBQ16585 318 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SLC25A35Q3KQZ1 300 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 C1orf185Q5T7R7 199 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 BICRALQ6AI39 1079 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 RTL6Q6ICC9 239 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 C3orf33Q6P1S2 294 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 NIPAL3Q6P499 406 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 TMPRSS11AQ6ZMR5 421 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 TRILQ7L0X0 811 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 BIVMQ86UB2 503 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ANKRD13BQ86YJ7 626 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
SS18-210ENST00000578700 KLHL36Q8N4N3 616 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 TMEM251Q8N6I4 163 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 OR2M3Q8NG83 312 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 OR4K13Q8NH42 304 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 C12orf43Q96C57 262 aaKnown RBP9.08□□□□□ -0.96
SS18-210ENST00000578700 C1GALT1C1Q96EU7 318 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
SS18-210ENST00000578700 COG8Q96MW5 612 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 MGLLQ99685 303 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 KATNB1Q9BVA0 655 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 FUNDC2Q9BWH2 189 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 POTEKPQ9BYX7 375 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 OR51V1Q9H2C8 321 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CXorf56Q9H5V9 222 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 HINT3Q9NQE9 182 aaKnown RBP9.08□□□□□ -0.96
SS18-210ENST00000578700 INPP5EQ9NRR6 644 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 INIPQ9NRY2 104 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 ENPP5Q9UJA9 477 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 RTTNQ86VV8 2226 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 A0A1W2PRG6 482 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 TMEM129A0AVI4 362 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 OR14I1A6ND48 311 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 GJE1A6NN92 205 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 C17orf51A8MQB3 221 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 H3BMQ9 156 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 ETV2O00321 342 aaPredicted RBP9.07□□□□□ -0.96
SS18-210ENST00000578700 SLC22A1O15245 554 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 NPIPB7O75200 414 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 BGLAPP02818 100 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 INHBBP09529 407 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 TSPAN19P0C672 248 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
SS18-210ENST00000578700 AHCYP23526 432 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 DPP4P27487 766 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 GRPRP30550 384 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 SDHAP31040 664 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 PTGDSP41222 190 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 DNASE1L1P49184 302 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 RPL18Q07020 188 aaKnown RBP9.07□□□□□ -0.96
SS18-210ENST00000578700 SELENBP1Q13228 472 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 PLPPR5Q32ZL2 321 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 SLC35D3Q5M8T2 416 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 ADCK1Q86TW2 530 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 FAM109AQ8N4B1 249 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 POMGNT2Q8NAT1 580 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 ATP6V1C2Q8NEY4 427 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 OR51G2Q8NGK0 314 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 MOSPD2Q8NHP6 518 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 TMEM41AQ96HV5 264 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 C18orf12Q96KH6 178 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 MOGAT1Q96PD6 335 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 MDFIQ99750 246 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 FAM173AQ9BQD7 235 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 ZDHHC11Q9H8X9 412 aa9.07□□□□□ -0.96
SS18-210ENST00000578700 MRPL39Q9NYK5 338 aaKnown RBP9.07□□□□□ -0.96
SS18-210ENST00000578700 EXOGQ9Y2C4 368 aaKnown RBP9.07□□□□□ -0.96
SS18-210ENST00000578700 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
SS18-210ENST00000578700 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
SS18-210ENST00000578700 TRGV5A0A0B4J1U4 118 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms