RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CCL17Q92583 94 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 TXNDC15Q96J42 360 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 TSPAN32Q96QS1 320 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 MRI1Q9BV20 369 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 TCF7L2Q9NQB0 619 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 UBAP1Q9NZ09 502 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 PKD1L1Q8TDX9 2849 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 TYROBPO43914 113 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 SERPINI2O75830 405 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 OR6A2O95222 327 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 IGHV3-13P01766 116 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 ALDOCP09972 364 aaKnown RBP11.34□□□□□ -0.59
COPS3-214ENST00000577246 PATE4P0C8F1 98 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 ETS2P15036 469 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 IL12AP29459 219 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 GCH1P30793 250 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 MTNR1AP48039 350 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 SLC1A6P48664 564 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 NRN1LQ496H8 165 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 ZMAT1Q5H9K5 638 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 MSANTD1Q6ZTZ1 278 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 KRT73Q86Y46 540 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 ITCHQ96J02 903 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 PKNOX2Q96KN3 472 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 DUX5Q96PT3 197 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 SPATA5L1Q9BVQ7 753 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 ROPN1BQ9BZX4 212 aaPredicted RBP11.34□□□□□ -0.59
COPS3-214ENST00000577246 OR51B6Q9H340 312 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 ROPN1Q9HAT0 212 aaPredicted RBP11.34□□□□□ -0.59
COPS3-214ENST00000577246 TMEM27Q9HBJ8 222 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 A4GALTQ9NPC4 353 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 CYSLTR2Q9NS75 346 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 TMEM38BQ9NVV0 291 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 GLTPQ9NZD2 209 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 CGGBP1Q9UFW8 167 aaPredicted RBP11.34□□□□□ -0.59
COPS3-214ENST00000577246 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
COPS3-214ENST00000577246 HAO1Q9UJM8 370 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 PURGQ9UJV8 347 aaKnown RBP11.34□□□□□ -0.59
COPS3-214ENST00000577246 AUP1Q9Y679 476 aa11.34□□□□□ -0.59
COPS3-214ENST00000577246 A0A1B0GUS0 222 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 WDR91A4D1P6 747 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 PLPP3O14495 311 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 MGRN1O60291 552 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 SLC22A3O75751 556 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 MFN2O95140 757 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 BGLAPP02818 100 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 IDO1P14902 403 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 ZFP36P26651 326 aaKnown RBP11.33□□□□□ -0.6
COPS3-214ENST00000577246 APLNRP35414 380 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 LIPAP38571 399 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 BIDP55957 195 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 FADDQ13158 208 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
COPS3-214ENST00000577246 SLC16A14Q7RTX9 510 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 C1orf174Q8IYL3 243 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 PAQR4Q8N4S7 273 aaPredicted RBP11.33□□□□□ -0.6
COPS3-214ENST00000577246 SPICQ8N5J4 248 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 DEFB108BQ8NET1 73 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 OR5J2Q8NH18 312 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 ZNF566Q969W8 418 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 DIRC2Q96SL1 478 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 TMEM43Q9BTV4 400 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 MS4A7Q9GZW8 240 aaPredicted RBP11.33□□□□□ -0.6
COPS3-214ENST00000577246 EVA1AQ9H8M9 152 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 SLC6A13Q9NSD5 602 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 SLC13A4Q9UKG4 626 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 CACNG2Q9Y698 323 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 TGP01266 2768 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 TRRAPQ9Y4A5 3859 aa11.33□□□□□ -0.6
COPS3-214ENST00000577246 IGHMP01871 453 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 CCL2P13500 99 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 HTR2AP28223 471 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 ERVS71-1P61550 626 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 GLO1Q04760 184 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 ZNF154Q13106 437 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 ZNF718Q3SXZ3 478 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 C6orf10Q5SRN2 563 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 DHRS4L2Q6PKH6 230 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 NHLRC1Q6VVB1 395 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 ZNF771Q7L3S4 317 aaPredicted RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 RANBP3LQ86VV4 465 aaPredicted RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 KLHL36Q8N4N3 616 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 BHLHE22Q8NFJ8 381 aaPredicted RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 OR1J1Q8NGS3 322 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 FGFBP3Q8TAT2 258 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 SORT1Q99523 831 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 SLC19A3Q9BZV2 496 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 KCNN2Q9H2S1 579 aa11.32□□□□□ -0.6
COPS3-214ENST00000577246 EIF3KQ9UBQ5 218 aaKnown RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 LEF1Q9UJU2 399 aaPredicted RBP11.32□□□□□ -0.6
COPS3-214ENST00000577246 POLR3KQ9Y2Y1 108 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms