RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ANKRD26P1Q6NSI1 321 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TRIM40Q6P9F5 258 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CNIH2Q6PI25 160 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TGIF2LYQ8IUE0 185 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 MKXQ8IYA7 352 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 PIANPQ8IYJ0 282 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 MS4A15Q8N5U1 240 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 EID2Q8N6I1 236 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 PQLC3Q8N755 202 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 NKAPP1Q8N9T2 125 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 DCAF4L2Q8NA75 395 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ZNF740Q8NDX6 193 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ZNF502Q8TBZ5 544 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 MARCH1Q8TCQ1 289 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 GPR151Q8TDV0 419 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 RNF138Q8WVD3 245 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CHCHD10Q8WYQ3 142 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 SMARCD2Q92925 531 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ISG20Q96AZ6 181 aaKnown RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 SGK3Q96BR1 496 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ZNF799Q96GE5 643 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ITCHQ96J02 903 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 OR5B12Q96R08 314 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TGS1Q96RS0 853 aaKnown RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 P2RY13Q9BPV8 354 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ECSITQ9BQ95 431 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 SIKE1Q9BRV8 207 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ILKAPQ9H0C8 392 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 DNTTIP1Q9H147 329 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ELOVL6Q9H5J4 265 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CWH43Q9H720 699 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 C8orf33Q9H7E9 229 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 LY9Q9HBG7 655 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 LYRM4Q9HD34 91 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 RETNQ9HD89 108 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ADAP2Q9NPF8 381 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 MMP26Q9NRE1 261 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 KIF25Q9UIL4 384 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 LSM7Q9UK45 103 aaKnown RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 RHBDD3Q9Y3P4 386 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 NOTCH2Q04721 2471 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 AGRNO00468 2067 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 UBN2Q6ZU65 1347 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CDHR2Q9BYE9 1310 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 HCFC1P51610 2035 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 A0A0G2JLM5 398 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 AIREO43918 545 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 SUPT7LO94864 414 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 SERPINA5P05154 406 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CCDC172P0C7W6 258 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 UBCP0CG48 685 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 SRMP19623 302 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 STOMP27105 288 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 FMO3P31513 532 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 OTX1P32242 354 aaPredicted RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 RORAP35398 523 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 VHLP40337 213 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CDKN1BP46527 198 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 ZNF133P52736 654 aaPredicted RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 DLX1P56177 255 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CLDN8P56748 225 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 FBXW4P57775 412 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 GPX6P59796 221 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 UBE2MP61081 183 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 HERVK_113P61574 105 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 GNB2P62879 340 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 MECOMQ03112 1051 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 ITIH4Q14624 930 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 ATP6AP1Q15904 470 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 GPR157Q5UAW9 335 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 OR52W1Q6IF63 320 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 LCN12Q6JVE5 192 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 ZNF620Q6ZNG0 422 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 Q6ZSR3 168 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 SCD5Q86SK9 330 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 LHFPL3Q86UP9 236 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 MFSD6LQ8IWD5 586 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 RDH10Q8IZV5 341 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 FAM71E2Q8N5Q1 922 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 FBXL13Q8NEE6 735 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 OR10G9Q8NGN4 311 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 LYPD6BQ8NI32 183 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 RHEBL1Q8TAI7 183 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 FANK1Q8TC84 345 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CXorf40AQ8TE69 158 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CAPSLQ8WWF8 208 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 DCUN1D4Q92564 292 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 EXOSC8Q96B26 276 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 RPUSD4Q96CM3 377 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 TMEM246Q9BRR3 403 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 RACGAP1Q9H0H5 632 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CYP3A43Q9HB55 503 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 MRPL47Q9HD33 250 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 ABCB10Q9NRK6 738 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 AGPAT4Q9NRZ5 378 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 LYARQ9NX58 379 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 MTCH1Q9NZJ7 389 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 UXTQ9UBK9 157 aaPredicted RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 ZNF225Q9UK10 706 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 DDX19BQ9UMR2 479 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms