RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ACTR6Q9GZN1 396 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 NELFAQ9H3P2 528 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 RIBC2Q9H4K1 309 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 DUSP21Q9H596 190 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 FKRPQ9H9S5 495 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 MCCC2Q9HCC0 563 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 NANSQ9NR45 359 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 NPAP1Q9NZP6 1156 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 EMC3Q9P0I2 261 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 KIF17Q9P2E2 1029 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF229Q9UJW7 825 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 RASD1Q9Y272 281 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 MED31Q9Y3C7 131 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ADAM18Q9Y3Q7 739 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 GMPPBQ9Y5P6 360 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 A0A096LPE4 126 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SH3D21A4FU49 640 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SLC35F4A4IF30 521 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 EFCAB9A8MZ26 197 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 M0R3G1 203 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 RNF13O43567 381 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 MRPL33O75394 65 aaKnown RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF432O94892 652 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SAGP10523 405 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 OSMP13725 252 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ATP6V1B1P15313 513 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 KIR2DL3P43628 341 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 GSSP48637 474 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SLC9A3P48764 834 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 MAP2K6P52564 334 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 BIDP55957 195 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 RPS4XP62701 263 aaKnown RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SLC35A2P78381 396 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 PRKCDQ05655 676 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 COX10Q12887 443 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 C1DQ13901 141 aaKnown RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SLX4IPQ5VYV7 408 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 C12orf73Q69YU5 71 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 GTF2IRD2BQ6EKJ0 949 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ZER1Q7Z7L7 766 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 GTF2IRD2Q86UP8 949 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 MYPOPQ86VE0 399 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SATL1Q86VE3 508 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 KIF18BQ86Y91 864 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 UEVLDQ8IX04 471 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ENTHD1Q8IYW4 607 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF433Q8N7K0 673 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 LRRC75AQ8NAA5 344 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ADPRHL1Q8NDY3 354 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 RHOXF1Q8NHV9 184 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ASB10Q8WXI3 467 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM45BQ96B21 275 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 RASD2Q96D21 266 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 FOXN4Q96NZ1 517 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 OXGR1Q96P68 337 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 TSPAN32Q96QS1 320 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 TNFRSF13CQ96RJ3 184 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 PLA2G12AQ9BZM1 189 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SLCO5A1Q9H2Y9 848 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 LIME1Q9H400 295 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 EGLN3Q9H6Z9 239 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 SEC61A2Q9H9S3 476 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 NOX3Q9HBY0 568 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 GLRX2Q9NS18 164 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 PLCXD1Q9NUJ7 323 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 FKBP14Q9NWM8 211 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 PAK1IP1Q9NWT1 392 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF226Q9NYT6 803 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 TMCC3Q9ULS5 477 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 PCDHGB1Q9Y5G3 927 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 AKAP6Q13023 2319 aa6.95□□□□□ -1.3
CCDC40-215ENST00000576033 RAI1Q7Z5J4 1906 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-215ENST00000576033 TUBAL3A6NHL2 446 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 TRIM64BA6NI03 449 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 DEFB108AA8MXU0 73 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF701M0R085 212 aaPredicted RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 OR2T1O43869 369 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 OR10H3O60404 316 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SOX14O95416 240 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SLC2A10O95528 541 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 PLAUP00749 431 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 MT-ATP6P00846 226 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 TSPAN19P0C672 248 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF43P17038 809 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 FKBP2P26885 142 aaKnown RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 LOXP28300 417 aaPredicted RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 CRISP1P54107 249 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ERVK-25P63136 954 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 CSNK2BP67870 215 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 EFNB1P98172 346 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ROR2Q01974 943 aaKnown RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 TLE4Q04727 773 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 TAB1Q15750 504 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ACKR1Q16570 336 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ALG10Q5BKT4 473 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SFRP5Q5T4F7 317 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 FBXW9Q5XUX1 488 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms