RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 RPL36A-HNRNPH2H7BZ11 118 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 CCNB2O95067 398 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 PRSS23O95084 383 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 IGF2P01344 180 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 SAGP10523 405 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 PTAFRP25105 342 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 CD40P25942 277 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 CSNK1A1P48729 337 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 CDH11P55287 796 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 PPP1R8Q12972 351 aaKnown RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 ZNF672Q499Z4 452 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 IQCCQ4KMZ1 466 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 ANKRD16Q6P6B7 361 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 SHQ1Q6PI26 577 aaKnown RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 SLC22A25Q6T423 547 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 NHLRC1Q6VVB1 395 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 ZBTB49Q6ZSB9 765 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 TSEN54Q7Z6J9 526 aaKnown RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 LILRB1Q8NHL6 650 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 MOSPD2Q8NHP6 518 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 BCL2L2Q92843 193 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 PIGTQ969N2 578 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 FBXW5Q969U6 566 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 ADAD1Q96M93 576 aaKnown RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 CIB1Q99828 191 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 NELFAQ9H3P2 528 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 BEX4Q9NWD9 120 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-216ENST00000575599 POU2F3Q9UKI9 436 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 OAZ3Q9UMX2 235 aa11.59□□□□□ -0.55
RPAIN-216ENST00000575599 A0A1W2PRG6 482 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 A0A1W2PRQ8 180 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-216ENST00000575599 SHISA9B4DS77 424 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 CASQ2O14958 399 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-216ENST00000575599 SMPD2O60906 423 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 BCL10O95999 233 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 MAKP20794 623 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 IFNGR2P38484 337 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 CAPZA2P47755 286 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 PTDSS1P48651 473 aaKnown RBP11.58□□□□□ -0.56
RPAIN-216ENST00000575599 DGCR6Q14129 220 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 LPCAT4Q643R3 524 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 TBPL2Q6SJ96 375 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 LINC00471Q8N535 108 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF611Q8N823 705 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 OR6X1Q8NH79 312 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 GIPC3Q8TF64 312 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 LIPHQ8WWY8 451 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ACOT11Q8WXI4 607 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF566Q969W8 418 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 NRBF2Q96F24 287 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 LRR1Q96L50 414 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 CXXC4Q9H2H0 198 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF556Q9HAH1 456 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 NTN4Q9HB63 628 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 OBP2BQ9NPH6 170 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 C8orf4Q9NR00 106 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 INIPQ9NRY2 104 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 PDP1Q9P0J1 537 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-216ENST00000575599 POFUT2Q9Y2G5 429 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ORC6Q9Y5N6 252 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 LYVE1Q9Y5Y7 322 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 DSCAMO60469 2012 aa11.58□□□□□ -0.56
RPAIN-216ENST00000575599 ROS1P08922 2347 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 A0A087WUU8 490 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 ARPC4-TTLL3A0A0A6YYG9 625 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 EFCAB9A8MZ26 197 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 OR10H3O60404 316 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 PEX2P28328 305 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 VHLP40337 213 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 GPR4P46093 362 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 DAP3P51398 398 aaKnown RBP11.57□□□□□ -0.56
RPAIN-216ENST00000575599 CLRN1P58418 232 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 PRKCDQ05655 676 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 TOP3AQ13472 1001 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-216ENST00000575599 MICAQ29983 383 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 ALG10Q5BKT4 473 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 SPNS3Q6ZMD2 512 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 MBOAT2Q6ZWT7 520 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 CDK20Q8IZL9 346 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 ATG16L2Q8NAA4 619 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 OR13C2Q8NGS9 318 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 TMEM171Q8WVE6 324 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 PERPQ96FX8 193 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 SLC25A44Q96H78 314 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-216ENST00000575599 BOD1Q96IK1 185 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 RADILQ96JH8 1075 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
RPAIN-216ENST00000575599 GLTPQ9NZD2 209 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 MGAT4BQ9UQ53 548 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 CADP27708 2225 aa11.57□□□□□ -0.56
RPAIN-216ENST00000575599 TRBV4-1A0A0J9YWV2 114 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 IGHG1P01857 330 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 PGA4P0DJD7 388 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 PGA3P0DJD8 388 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 B4GALT1P15291 398 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms