RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 RPL36Q9Y3U8 105 aaKnown RBP21.33■■□□□ 1
ATPAF1-213ENST00000574428 SNTNA6NMZ2 147 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 AKAP8O43823 692 aaKnown RBP21.32■■□□□ 1
ATPAF1-213ENST00000574428 SLC16A7O60669 478 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 APOL3O95236 402 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 CTLA4P16410 223 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 CSNK2BP67870 215 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 PIGFQ07326 219 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 NFATC3Q12968 1075 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.32■■□□□ 1
ATPAF1-213ENST00000574428 PROKR2Q8NFJ6 384 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 OR2T4Q8NH00 348 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 RNFT2Q96EX2 444 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 TEAD3Q99594 435 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 ALG12Q9BV10 488 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 YIPF3Q9GZM5 350 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 RCE1Q9Y256 329 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 NOSIPQ9Y314 301 aaKnown RBP21.32■■□□□ 1
ATPAF1-213ENST00000574428 TPRKBQ9Y3C4 175 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 SPTA1P02549 2419 aa21.32■■□□□ 1
ATPAF1-213ENST00000574428 M0R3G1 203 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 MTNR1AP48039 350 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 LGALS3BPQ08380 585 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 GTF2IRD2BQ6EKJ0 949 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 KCTD8Q6ZWB6 473 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 GTF2IRD2Q86UP8 949 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 OR6K6Q8NGW6 343 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 GGHQ92820 318 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 IGKV1D-43A0A0B4J1Z2 117 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 FIGNL2A6NMB9 653 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 ZNF724A8MTY0 619 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 WDR1O75083 606 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 YES1P07947 543 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 HTR1AP08908 422 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 GSTT1P30711 240 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 SLC15A1P46059 708 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 CSNK1A1P48729 337 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 ETFDHQ16134 617 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 CNPY1Q3B7I2 92 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 NSUN5P2Q63ZY6 315 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 RTL6Q6ICC9 239 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 C3P1Q6ZMU1 363 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 C9orf106Q8NAJ2 232 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 WNT2BQ93097 391 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 TMEM45BQ96B21 275 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 ZMYND19Q96E35 227 aaPredicted RBP21.31■■□□□ 1
ATPAF1-213ENST00000574428 FOXN4Q96NZ1 517 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 B9D1Q9UPM9 204 aa21.31■■□□□ 1
ATPAF1-213ENST00000574428 SLC22A31A6NKX4 558 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 AHCYL1O43865 530 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 EDN3P14138 238 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 GABRA1P14867 456 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 SLC35A2P78381 396 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 HIST3H3Q16695 136 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 PHYHD1Q5SRE7 291 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 LYPD4Q6UWN0 246 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 SHFQ7M4L6 423 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 ZBTB46Q86UZ6 589 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 GCNT2Q8N0V5 402 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 OR6N1Q8NGY5 312 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 CPT1CQ8TCG5 803 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 NMD3Q96D46 503 aaKnown RBP21.3■■□□□ 1
ATPAF1-213ENST00000574428 DGCR14Q96DF8 476 aaKnown RBP21.3■■□□□ 1
ATPAF1-213ENST00000574428 FKBP14Q9NWM8 211 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 ERVK-18Q9QC07 812 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 WARS2Q9UGM6 360 aaKnown RBP21.3■■□□□ 1
ATPAF1-213ENST00000574428 FAM215AQ9Y5M1 114 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 FKBP7Q9Y680 259 aa21.3■■□□□ 1
ATPAF1-213ENST00000574428 IGLV1-36A0A0B4J1U3 117 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 SLC19A2O60779 497 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 GPANK1O95872 356 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 EDNRAP25101 427 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 AGTR1P30556 359 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 C1orf185Q5T7R7 199 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 LINC01590Q5TEZ4 76 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 NSMAFQ92636 917 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 TMEM54Q969K7 222 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 LGALS12Q96DT0 336 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 GMPPAQ96IJ6 420 aaPredicted RBP21.29■■□□□ 1
ATPAF1-213ENST00000574428 RBP7Q96R05 134 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 COPS4Q9BT78 406 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 DUSP21Q9H596 190 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 GLTPQ9NZD2 209 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 CEPT1Q9Y6K0 416 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 GTF3C1Q12789 2109 aa21.29■■□□□ 1
ATPAF1-213ENST00000574428 CD8B2A6NJW9 211 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 SLC43A1O75387 559 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 MRPL33O75394 65 aaKnown RBP21.28■■□□□ 1
ATPAF1-213ENST00000574428 GLCEO94923 617 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 CENPAP49450 140 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 SF3B4Q15427 424 aaKnown RBP eCLIP21.28■■□□□ 1
ATPAF1-213ENST00000574428 SLC35D3Q5M8T2 416 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 THEM4Q5T1C6 240 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 NUFIP2Q7Z417 695 aaKnown RBP21.28■■□□□ 1
ATPAF1-213ENST00000574428 C20orf196Q8IYI0 205 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 RPRMLQ8N4K4 120 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 OR51G2Q8NGK0 314 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 MCHR2Q969V1 340 aa21.28■■□□□ 1
ATPAF1-213ENST00000574428 FOXD3Q9UJU5 478 aaPredicted RBP21.28■■□□□ 1
ATPAF1-213ENST00000574428 EFCAB10A6NFE3 127 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms