RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 XKRYO14609 159 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 AHCYL1O43865 530 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 MGRN1O60291 552 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 DEAF1O75398 565 aaPredicted RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 HRGP04196 525 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 QDPRP09417 244 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 GSTM3P21266 225 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 ACVR1BP36896 505 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 ZNF84P51523 738 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 RPS6KA3P51812 740 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 UBE2NP61088 152 aaKnown RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 ARF1P84077 181 aaKnown RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 TOP3AQ13472 1001 aaPredicted RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 HIST3H3Q16695 136 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 RFX4Q33E94 735 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 GPR139Q6DWJ6 353 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 KLHL17Q6TDP4 642 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 C22orf34Q6ZV56 151 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 IGFN1Q86VF2 1251 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 ARIH2OSQ8N7S6 290 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 NOXO1Q8NFA2 376 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 OR52N5Q8NH56 324 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 GIPC3Q8TF64 312 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 PYDC1Q8WXC3 89 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 BCL2L2Q92843 193 aaPredicted RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 PIK3IP1Q96FE7 263 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 RBP7Q96R05 134 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 FOXB1Q99853 325 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 KATNB1Q9BVA0 655 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 MRPL13Q9BYD1 178 aaKnown RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 CLEC4MQ9H2X3 399 aaPredicted RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 ESRP2Q9H6T0 727 aaKnown RBP9.67□□□□□ -0.86
CHD3-216ENST00000573936 ARMC1Q9NVT9 282 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 U3KQV3 271 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 DEFB108AA8MXU0 73 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 H0YHG0 523 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 H3BNX3 289 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 IMPA2O14732 288 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 DHHO43323 396 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 E2F6O75461 281 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 GASTP01350 101 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 FCGR1AP12314 374 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 APEHP13798 732 aaKnown RBP9.66□□□□□ -0.86
CHD3-216ENST00000573936 SDHAP31040 664 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 SLC6A6P31641 620 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 GUCA1AP43080 201 aaPredicted RBP9.66□□□□□ -0.86
CHD3-216ENST00000573936 ERVK-25P63136 954 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 COX10Q12887 443 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 PPP1R8Q12972 351 aaKnown RBP9.66□□□□□ -0.86
CHD3-216ENST00000573936 TBRG1Q3YBR2 411 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 PHYHD1Q5SRE7 291 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 THEM4Q5T1C6 240 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 ZNF770Q6IQ21 691 aaPredicted RBP9.66□□□□□ -0.86
CHD3-216ENST00000573936 ALKBH2Q6NS38 261 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 RASSF6Q6ZTQ3 369 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 ZNF627Q7L945 461 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 WDR31Q8NA23 367 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 AQP11Q8NBQ7 271 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 OR9Q2Q8NGE9 314 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 OR52L1Q8NGH7 329 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 ZNF519Q8TB69 540 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 FANK1Q8TC84 345 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 NRGNQ92686 78 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 HDAC2Q92769 488 aaKnown RBP9.66□□□□□ -0.86
CHD3-216ENST00000573936 STMN2Q93045 179 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 MCHR2Q969V1 340 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 PLPPR2Q96GM1 343 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 ZNF570Q96NI8 536 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 TSPAN32Q96QS1 320 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 KCNK17Q96T54 332 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 GPA33Q99795 319 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 DGCR6LQ9BY27 220 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 OR52D1Q9H346 318 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 SMURF2Q9HAU4 748 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 S100A14Q9HCY8 104 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 NRIP3Q9NQ35 241 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 VNN3Q9NY84 501 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 AP4S1Q9Y587 144 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 ABCA4P78363 2273 aa9.66□□□□□ -0.86
CHD3-216ENST00000573936 FBN3Q75N90 2809 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.65□□□□□ -0.86
CHD3-216ENST00000573936 ARHGEF9O43307 516 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 IDH3BO43837 385 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 TIPRLO75663 272 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 FARS2O95363 451 aaKnown RBP9.65□□□□□ -0.86
CHD3-216ENST00000573936 TXNDC12O95881 172 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 CD3EP07766 207 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 ANXA8P13928 327 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 PTAFRP25105 342 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 FASP25445 335 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 ZNF133P52736 654 aaPredicted RBP9.65□□□□□ -0.86
CHD3-216ENST00000573936 RUNX1T1Q06455 604 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 CD47Q08722 323 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 C3orf36Q3SXR2 165 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 NRN1LQ496H8 165 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 HIKESHIQ53FT3 197 aa9.65□□□□□ -0.86
CHD3-216ENST00000573936 NCMAPQ5T1S8 102 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms