RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 C11orf88Q6PI97 169 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 MED25Q71SY5 747 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 MCATQ8IVS2 390 aaKnown RBP14.18□□□□□ -0.14
NUP88-207ENST00000573584 OR8S1Q8NH09 359 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TSPAN32Q96QS1 320 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 CCNL2Q96S94 520 aaPredicted RBP14.18□□□□□ -0.14
NUP88-207ENST00000573584 EML5Q05BV3 1969 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 CHURC1-FNTBB4DL54 471 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TEX46H3BTG2 121 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 GPANK1O95872 356 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TXNDC12O95881 172 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 CALCRP30988 508 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 POU3F4P49335 361 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 EGR3Q06889 387 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 RASGEF1BQ0VAM2 473 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 ARMC6Q6NXE6 501 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 AVL9Q8NBF6 648 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 ZBTB44Q8NCP5 570 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TSEN15Q8WW01 171 aaKnown RBP14.18□□□□□ -0.14
NUP88-207ENST00000573584 MCHR2Q969V1 340 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 SHARPINQ9H0F6 387 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 SYT4Q9H2B2 425 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 SEMA6CQ9H3T2 930 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 FANCMQ8IYD8 2048 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 KRBOX1C9JBD0 128 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TRIM77I1YAP6 450 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 LGALS8O00214 317 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 KDM4BO94953 1096 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 CELA2BP08218 269 aaPredicted RBP14.18□□□□□ -0.14
NUP88-207ENST00000573584 FBXO45P0C2W1 286 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 AKAIN1P0CW23 69 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 GK2Q14410 553 aaPredicted RBP14.18□□□□□ -0.14
NUP88-207ENST00000573584 C4orf46Q504U0 113 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TSSK4Q6SA08 328 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 NAXDQ8IW45 347 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 KTI12Q96EK9 354 aaPredicted RBP14.18□□□□□ -0.14
NUP88-207ENST00000573584 MRGPRX1Q96LB2 322 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 DCBLD2Q96PD2 775 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 INTS14Q96SY0 518 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 C12orf4Q9NQ89 552 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 CLDN16Q9Y5I7 305 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 TMEM14AQ9Y6G1 99 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 A8MXK9 166 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 RENP00797 406 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 IGF2P01344 180 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 TNFP01375 233 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 CD3DP04234 171 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 ITGA5P08648 1049 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 PRSS3P35030 304 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 IGLV3-21P80748 117 aaPredicted RBP14.17□□□□□ -0.14
NUP88-207ENST00000573584 FUT7Q11130 342 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 C2orf76Q3KRA6 126 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 LRRC69Q6ZNQ3 347 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 KRT77Q7Z794 578 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 PARGQ86W56 976 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 GPBAR1Q8TDU6 330 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 DVL3Q92997 716 aaPredicted RBP14.17□□□□□ -0.14
NUP88-207ENST00000573584 CHST6Q9GZX3 395 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 KCNK15Q9H427 330 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 EXO5Q9H790 373 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 UBQLN4Q9NRR5 601 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 CCKBRP32239 447 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 CSF2RBP32927 897 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 MAZP56270 477 aaKnown RBP14.17□□□□□ -0.14
NUP88-207ENST00000573584 YPEL5P62699 121 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 DMWDQ09019 674 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 EMC4Q5J8M3 183 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 NKAIN2Q5VXU1 208 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 OVCH2Q7RTZ1 564 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 BIVMQ86UB2 503 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 ZNF615Q8N8J6 731 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 ST8SIA4Q92187 359 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 AMELYQ99218 206 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 MNTQ99583 582 aa14.17□□□□□ -0.14
NUP88-207ENST00000573584 RANBP2P49792 3224 aaKnown RBP14.17□□□□□ -0.14
NUP88-207ENST00000573584 MST1P26927 711 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 KIR3DL2P43630 455 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 SKP2Q13309 424 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 WDR38Q5JTN6 314 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 EEF1A1P5Q5VTE0 462 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 OTPQ5XKR4 325 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 FAM3DQ96BQ1 224 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 ZNF524Q96C55 264 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 C4orf45Q96LM5 186 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 ELF4Q99607 663 aaPredicted RBP14.16□□□□□ -0.14
NUP88-207ENST00000573584 DPYSL5Q9BPU6 564 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 APMAPQ9HDC9 416 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 KCNG2Q9UJ96 466 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 KIR2DS5A0A0G2JLQ3 304 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 A0A0G2JNG1 304 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 TMEM272A0A1B0GTI8 110 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 KIR2DS3K7RE56 304 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 AKT2P31751 481 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 KIR2DS5Q14953 304 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 PRTGQ2VWP7 1150 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 ARSKQ6UWY0 536 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 TAF8Q7Z7C8 310 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms