RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 Q6ZSR9 355 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TSEN54Q7Z6J9 526 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF554Q86TJ5 538 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PIGZQ86VD9 579 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC47A2Q86VL8 602 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PHF13Q86YI8 300 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CLVS1Q8IUQ0 354 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PDIK1LQ8N165 341 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 OR2L13Q8N349 312 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 OR9Q2Q8NGE9 314 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 OR1S2Q8NGQ3 325 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 OR52N1Q8NH53 320 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 MRGPRDQ8TDS7 321 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 NEDD4LQ96PU5 975 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 HBEGFQ99075 208 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 EPYCQ99645 322 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CABLES2Q9BTV7 478 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CALN1Q9BXU9 219 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ARL6Q9H0F7 186 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PCBD2Q9H0N5 130 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TLNRD1Q9H1K6 362 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 DSN1Q9H410 356 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 GLIPR2Q9H4G4 154 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 APOBEC3GQ9HC16 384 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 EML4Q9HC35 981 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 UBE2TQ9NPD8 197 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ACP6Q9NPH0 428 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 MBNL3Q9NUK0 354 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PRODH2Q9UF12 536 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 C19orf25Q9UFG5 118 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TCF19Q9Y242 345 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 RAI2Q9Y5P3 530 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 NUP155O75694 1391 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ZFYVE9O95405 1425 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 SPATA31D1Q6ZQQ2 1576 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CCDC171Q6TFL3 1326 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 TRAV8-7A0A075B6U6 113 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 A0A0A6YYD4 124 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 A0A0B4J2E0 115 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KIR2DL5BA0A0G2JN68 375 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KIR2DL5BA0A0G2JPC4 375 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KIR2DS1A0A191URI9 304 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 A0A1B0GX12 115 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 GJE1A6NN92 205 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 HACD1B0YJ81 288 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 C21orf140B9A014 251 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 E9PAM4 449 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 F5H768 121 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 SLC1A7O00341 560 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KPNA3O00505 521 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 HSD17B6O14756 317 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 TIMM23O14925 209 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 ITM2AO43736 263 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 CXCL13O43927 109 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 CDC40O60508 579 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 UGT1A9O60656 530 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 SNAP29O95721 258 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 HBE1P02100 147 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 FGF2P09038 288 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 SLC2A1P11166 492 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 GFAPP14136 432 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 CRABP1P29762 137 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 NTSP30990 170 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 RPL3P39023 403 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 P2RY4P51582 365 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 LBX1P52954 281 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 BACE1P56817 501 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM33P57088 247 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 FBXW4P57775 412 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 OR1D5P58170 312 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 RPL27P61353 136 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 RANP62826 216 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 FLI1Q01543 452 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 HMGCS1Q01581 520 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 PRKCDQ05655 676 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 EIF2B1Q14232 305 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 LAGE3Q14657 143 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KIR2DS1Q14954 304 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 MIDNQ504T8 468 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 ASPRV1Q53RT3 343 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 TYW3Q6IPR3 259 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF730Q6ZMV8 503 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 Q6ZRM9 215 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 FAM57BQ71RH2 274 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 APLFQ8IW19 511 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KIR2DL5AQ8N109 375 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 LINC01561Q8N1V8 128 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 NANOGP1Q8N7R0 232 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 ATP6V0D2Q8N8Y2 350 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 OR1J1Q8NGS3 322 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 OR11L1Q8NGX0 322 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 OR51F2Q8NH61 342 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 OR2AE1Q8NHA4 323 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 OR10J5Q8NHC4 309 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 SFXN5Q8TD22 340 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 CASTOR1Q8WTX7 329 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 MAFIPQ8WZ33 124 aa4.33□□□□□ -1.72
TOPBP1-210ENST00000572787 MRPS31Q92665 395 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms