RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SHOX2O60902 331 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 UBL3O95164 117 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 BCL10O95999 233 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 IGHG1P01857 330 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 ASAH2BP0C7U1 165 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 LSP1P33241 339 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 GIPRP48546 466 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 GALK2Q01415 458 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 GUCY1A3Q02108 690 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 GGTLC2Q14390 218 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 GKAP1Q5VSY0 366 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 PIWIL3Q7Z3Z3 882 aaKnown RBP10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 HDDC2Q7Z4H3 204 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 OR2T12Q8NG77 320 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 PFN4Q8NHR9 129 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM255BQ8WV15 326 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM54Q969K7 222 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 PRSS27Q9BQR3 290 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 MEPEQ9NQ76 525 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF446Q9NWS9 450 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 CMAHPQ9Y471 501 aa10.69□□□□□ -0.7
CTDNEP1-205ENST00000570828 LOC390937A0A1W2PQ73 354 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 A0A1W2PRG6 482 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 OR7A10O76100 309 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 FARS2O95363 451 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 MT-ND1P03886 318 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 PGA4P0DJD7 388 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 PGA3P0DJD8 388 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 THRBP10828 461 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF14P17017 642 aaPredicted RBP10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 NR4A1P22736 598 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 IFNA8P32881 189 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 NR4A2P43354 598 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 OR1E2P47887 323 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 DAP3P51398 398 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 CLRN1P58418 232 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 RPS23P62266 143 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 RAB1AP62820 205 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 RPL18Q07020 188 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 PIN1Q13526 163 aaPredicted RBP10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 CHRFAM7AQ494W8 412 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 IQCCQ4KMZ1 466 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 CYBRD1Q53TN4 286 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ARPINQ7Z6K5 226 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 HIPK1Q86Z02 1210 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 NKAIN4Q8IVV8 208 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 MICU2Q8IYU8 434 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 CDK20Q8IZL9 346 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC22A24Q8N4F4 322 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF540Q8NDQ6 660 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 NOXO1Q8NFA2 376 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM239Q8WW34 195 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 RCN3Q96D15 328 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 SGTBQ96EQ0 304 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 TPD52L3Q96J77 140 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF583Q96ND8 569 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 CCDC134Q9H6E4 229 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM38BQ9NVV0 291 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF224Q9NZL3 707 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ARMCX1Q9P291 453 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 RIMS3Q9UJD0 308 aa10.68□□□□□ -0.7
CTDNEP1-205ENST00000570828 ELOVL7A1L3X0 281 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 SH3PXD2BA1X283 911 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 VWC2LB2RUY7 222 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 DHHO43323 396 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 PEX14O75381 377 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 IGF2P01344 180 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 IFNA2P01563 188 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 F13BP05160 661 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 QDPRP09417 244 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 OR8G3PP0DMU2 310 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 IGHV4-31P0DP07 118 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 APEHP13798 732 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 FUT1P19526 365 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 KDELR2P33947 212 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 GZMKP49863 264 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 UGT2B15P54855 530 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 RAB39AQ14964 217 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 CYB5R2Q6BCY4 276 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 JAZF1Q86VZ6 243 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 SKA3Q8IX90 412 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 POU5F2Q8N7G0 328 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 NEU4Q8WWR8 484 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 LZICQ8WZA0 190 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 DOK1Q99704 481 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 INIPQ9NRY2 104 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 STX18Q9P2W9 335 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC7A8Q9UHI5 535 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 CDC42EP3Q9UKI2 254 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 AP3M1Q9Y2T2 418 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 MED31Q9Y3C7 131 aa10.67□□□□□ -0.7
CTDNEP1-205ENST00000570828 CENPBD1B2RD01 187 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 M0R233 179 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 SERPINA5P05154 406 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 PATE4P0C8F1 98 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF35P13682 527 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 DAOP14920 347 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 GLRXP35754 106 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 AQP2P41181 271 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF84P51523 738 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms