RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.67□□□□□ -0.22
HERPUD1-219ENST00000570273 ZNF835Q9Y2P0 537 aa13.67□□□□□ -0.22
HERPUD1-219ENST00000570273 FAM215AQ9Y5M1 114 aa13.67□□□□□ -0.22
HERPUD1-219ENST00000570273 SVILO95425 2214 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 MBD3L4A6NDZ8 208 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 MBD3L3A6NE82 208 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 CCDC182A6NF36 153 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 MBD3L5A6NJ08 208 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 SLC22A31A6NKX4 558 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 SLC16A7O60669 478 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 ZNF432O94892 652 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 TNFAIP8O95379 198 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 CCDC159P0C7I6 412 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 DBTP11182 482 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 CTLA4P16410 223 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 SLC2A5P22732 501 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 CRABP1P29762 137 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 HTR1FP30939 366 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 PER3P56645 1201 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 CSNK2BP67870 215 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 SIRPAP78324 504 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 RTL6Q6ICC9 239 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 B3GNT6Q6ZMB0 384 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 C3P1Q6ZMU1 363 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 OR6K6Q8NGW6 343 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 MBD3L2Q8NHZ7 208 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 FNDC8Q8TC99 324 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 TMEM54Q969K7 222 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 YTHDF1Q9BYJ9 559 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 PARPBPQ9NWS1 579 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 GLTPQ9NZD2 209 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 SH3BGRL2Q9UJC5 107 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 EMC9Q9Y3B6 208 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 TPRKBQ9Y3C4 175 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 RPL36Q9Y3U8 105 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 FKBP7Q9Y680 259 aa13.66□□□□□ -0.22
HERPUD1-219ENST00000570273 COL6A6A6NMZ7 2263 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 FAM171A2A8MVW0 826 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 DCTN6O00399 190 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 KHDRBS3O75525 346 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 CRHBPP24387 322 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 NTF4P34130 210 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 CENPAP49450 140 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 THEM4Q5T1C6 240 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 DOLPP1Q86YN1 238 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 ZNF100Q8IYN0 542 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 OR6V1Q8N148 313 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 GPR137CQ8N3F9 429 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 RPRMLQ8N4K4 120 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 NSMAFQ92636 917 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 KISS1RQ969F8 398 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 APH1AQ96BI3 265 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 INTS12Q96CB8 462 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 NMD3Q96D46 503 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 ZMYND19Q96E35 227 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 RHNO1Q9BSD3 238 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 ULBP2Q9BZM5 246 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 B3GAT2Q9NPZ5 323 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 PLCXD1Q9NUJ7 323 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 WARS2Q9UGM6 360 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 TINAGQ9UJW2 476 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 B9D1Q9UPM9 204 aa13.65□□□□□ -0.22
HERPUD1-219ENST00000570273 IGLV1-36A0A0B4J1U3 117 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 EFCAB10A6NFE3 127 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 GLCEO94923 617 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 RPSAP08865 295 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 QDPRP09417 244 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 EEF1B2P24534 225 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 GSTT1P30711 240 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 MTNR1AP48039 350 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 KCTD21Q4G0X4 260 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 B3GLCTQ6Y288 498 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 SEM1Q6ZVN7 128 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 AHSA2Q719I0 299 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 FAM214BQ7L5A3 538 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 ZBTB46Q86UZ6 589 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 CNEP1R1Q8N9A8 125 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF540Q8NDQ6 660 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 SLCO5A1Q9H2Y9 848 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 C12orf49Q9H741 205 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 PSORS1C1Q9UIG5 152 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 MOKQ9UQ07 419 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 IGKV1D-43A0A0B4J1Z2 117 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 OR6C65A6NJZ3 312 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 UPK3AO75631 287 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 C1QL1O75973 258 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 KRT33AO76009 404 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 APOL3O95236 402 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 LYNP07948 512 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 MRPL3P09001 348 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 TMIGD3P0DMS9 266 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms