RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 TAMM41Q96BW9 452 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF524Q96C55 264 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF385AQ96PM9 386 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF317Q96PQ6 595 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 FOXC2Q99958 501 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 TMEM43Q9BTV4 400 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 ULBP2Q9BZM5 246 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 POLR2J2Q9GZM3 115 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 POLR2J3Q9H1A7 115 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 KCNN2Q9H2S1 579 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 LIME1Q9H400 295 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 RNF121Q9H920 327 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 MOV10Q9HCE1 1003 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 SLC7A10Q9NS82 523 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 CISD1Q9NZ45 108 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 STX18Q9P2W9 335 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 MALT1Q9UDY8 824 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 SAMD4AQ9UPU9 718 aaKnown RBP4.24□□□□□ -1.73
CNOT1-219ENST00000569882 LAMP3Q9UQV4 416 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 RCE1Q9Y256 329 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 GMEB1Q9Y692 573 aa4.24□□□□□ -1.73
CNOT1-219ENST00000569882 MED13LQ71F56 2210 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ROS1P08922 2347 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ADGRG4Q8IZF6 3080 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TRIM64A6NGJ6 449 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TRIM64BA6NI03 449 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 DEFB108AA8MXU0 73 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 XKRYO14609 159 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SNX3O60493 162 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TMCC2O75069 709 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 B3GALNT1O75752 331 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SEC14L2O76054 403 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 OR5F1O95221 314 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 BCL10O95999 233 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SERPINA1P01009 418 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 IGHG1P01857 330 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 IFI30P13284 250 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 RPS2P15880 293 aaKnown RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ITGA2P17301 1181 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 COX5AP20674 150 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 PRDX6P30041 224 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 KDELR2P33947 212 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 RBM34P42696 430 aaKnown RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CSNK1A1P48729 337 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 FABP6P51161 128 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF84P51523 738 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 BIDP55957 195 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 PSME3P61289 254 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SELENOWP63302 87 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 H3F3AP84243 136 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CHRNB3Q05901 458 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CD47Q08722 323 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TOP3AQ13472 1001 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 PIN1Q13526 163 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CAMK2DQ13557 499 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TRAM2Q15035 370 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CARTPTQ16568 116 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 NRF1Q16656 503 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CEACAM16Q2WEN9 425 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TBRG1Q3YBR2 411 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 HIKESHIQ53FT3 197 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 NCMAPQ5T1S8 102 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 AGAP6Q5VW22 663 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SHEQ5VZ18 495 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ANKRD16Q6P6B7 361 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 VHLLQ6RSH7 139 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF813Q6ZN06 617 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 USP51Q70EK9 711 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SLC35D2Q76EJ3 337 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CCDC80Q76M96 950 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 LURAP1LQ8IV03 231 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 RNF148Q8N7C7 305 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SYT8Q8NBV8 401 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CCDC197Q8NCU1 140 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 GPR32P1Q8NGA4 272 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 LILRB1Q8NHL6 650 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SUN5Q8TC36 379 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SMAP2Q8WU79 429 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TMEM255BQ8WV15 326 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 TMEM239Q8WW34 195 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF566Q969W8 418 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SGTBQ96EQ0 304 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 PRRC1Q96M27 445 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 LRGUKQ96M69 825 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ADAD1Q96M93 576 aaKnown RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 NSMCE2Q96MF7 247 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF583Q96ND8 569 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 ARHGDIGQ99819 225 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 EMC6Q9BV81 110 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SLC19A3Q9BZV2 496 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 PLEKHF2Q9H8W4 249 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 CRLF2Q9HC73 371 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 OBP2BQ9NPH6 170 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SLC52A3Q9NQ40 469 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SLC17A5Q9NRA2 495 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 MED29Q9NX70 200 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 MRPL39Q9NYK5 338 aaKnown RBP4.23□□□□□ -1.73
CNOT1-219ENST00000569882 SEC14L4Q9UDX3 406 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 MAGEL2Q9UJ55 1249 aa4.23□□□□□ -1.73
CNOT1-219ENST00000569882 RIMS3Q9UJD0 308 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms