RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	SARAF	Q96BY9	339 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	INTS12	Q96CB8	462 aa	Known RBP	13.72	□□□□□ -0.21
CSK-211	ENST00000568329	ZMYND19	Q96E35	227 aa	Predicted RBP	13.72	□□□□□ -0.21
CSK-211	ENST00000568329	TXNDC15	Q96J42	360 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	TIMP4	Q99727	224 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	NUAK2	Q9H093	628 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	SRA1	Q9HD15	236 aa	Known RBP	13.72	□□□□□ -0.21
CSK-211	ENST00000568329	PLSCR2	Q9NRY7	297 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	KLHL9	Q9P2J3	617 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	B9D1	Q9UPM9	204 aa		13.72	□□□□□ -0.21
CSK-211	ENST00000568329	IGHV3-15	A0A0B4J1V0	119 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	SLC35F4	A4IF30	521 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	C12orf71	A8MTZ7	269 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	SLC16A7	O60669	478 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	RAMP1	O60894	148 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	PTH	P01270	115 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	PGA4	P0DJD7	388 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	PGA3	P0DJD8	388 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	PSMB9	P28065	219 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	WNT4	P56705	351 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	CLDN17	P56750	224 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	HSF2	Q03933	536 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	SRY	Q05066	204 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	SPHAR	Q15513	63 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	C19orf48	Q6RUI8	117 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	TMPRSS11A	Q6ZMR5	421 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	EGFL6	Q8IUX8	553 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	OR52N1	Q8NH53	320 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	COG8	Q96MW5	612 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	ERVK13-1	Q9NX77	482 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	EMC3	Q9P0I2	261 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	LUZP4	Q9P127	313 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	SPRR3	Q9UBC9	169 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	ATM	Q13315	3056 aa		13.71	□□□□□ -0.21
CSK-211	ENST00000568329	ZZEF1	O43149	2961 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	IGKV3D-15	A0A087WSY6	115 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	IGLV1-36	A0A0B4J1U3	117 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	DAPL1	A0PJW8	107 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	OR14I1	A6ND48	311 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	ZNF716	A6NP11	495 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	KHDRBS3	O75525	346 aa	Known RBP	13.71	□□□□□ -0.22
CSK-211	ENST00000568329	INMT	O95050	263 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	APOL3	O95236	402 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	SFTPC	P11686	197 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	FCGR2A	P12318	317 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	PYCR1	P32322	319 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	RUNX1T1	Q06455	604 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	RNPS1	Q15287	305 aa	Known RBP	13.71	□□□□□ -0.22
CSK-211	ENST00000568329	MED22	Q15528	200 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	TIGD6	Q17RP2	521 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	FAM180A	Q6UWF9	173 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	B3GLCT	Q6Y288	498 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	SLC16A9	Q7RTY1	509 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	KLHL36	Q8N4N3	616 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	SYT14	Q8NB59	555 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	OR10H4	Q8NGA5	316 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	OR51L1	Q8NGJ5	315 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	RNF128	Q8TEB7	428 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	WDYHV1	Q96HA8	205 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	TSSK2	Q96PF2	358 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	EMC6	Q9BV81	110 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	PRDM14	Q9GZV8	571 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	SLC25A18	Q9H1K4	315 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	MARCH7	Q9H992	704 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	RNF122	Q9H9V4	155 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	CAB39	Q9Y376	341 aa	Predicted RBP	13.71	□□□□□ -0.22
CSK-211	ENST00000568329	ZNF175	Q9Y473	711 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	TMEM14A	Q9Y6G1	99 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	MED12	Q93074	2177 aa		13.71	□□□□□ -0.22
CSK-211	ENST00000568329	ZNF701	M0R085	212 aa	Predicted RBP	13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ERVH48-1	M5A8F1	160 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	DCTN6	O00399	190 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	LCK	P06239	509 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	LIMS3	P0CW19	117 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	LIMS4	P0CW20	117 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	CTLA4	P16410	223 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	KLK2	P20151	261 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ETV1	P50549	477 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ACTA2	P62736	377 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ACTG2	P63267	376 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	RASGEF1B	Q0VAM2	473 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	CAMK2D	Q13557	499 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	GALE	Q14376	348 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	SHF	Q7M4L6	423 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.7	□□□□□ -0.22
CSK-211	ENST00000568329	TMEM45B	Q96B21	275 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	DGCR14	Q96DF8	476 aa	Known RBP	13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ZNF845	Q96IR2	970 aa	Predicted RBP	13.7	□□□□□ -0.22
CSK-211	ENST00000568329	INTS14	Q96SY0	518 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	PRRG4	Q9BZD6	226 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	YIPF3	Q9GZM5	350 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	RERGL	Q9H628	205 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	GP6	Q9HCN6	339 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	ISYNA1	Q9NPH2	558 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	TAS2R16	Q9NYV7	291 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	LSM2	Q9Y333	95 aa	Known RBP	13.7	□□□□□ -0.22
CSK-211	ENST00000568329	FLVCR1	Q9Y5Y0	555 aa		13.7	□□□□□ -0.22
CSK-211	ENST00000568329	KIAA1549	Q9HCM3	1950 aa		13.69	□□□□□ -0.22
CSK-211	ENST00000568329	PHYH	O14832	338 aa		13.69	□□□□□ -0.22
CSK-211	ENST00000568329	NOL3	O60936	208 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms