RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 HOXB9P17482 250 aaPredicted RBP13.16□□□□□ -0.3
PALB2-205ENST00000567003 CRYBB2P43320 205 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
PALB2-205ENST00000567003 NCALDP61601 193 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 TMEM255AQ5JRV8 349 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 ULK3Q6PHR2 472 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 DHRS4L2Q6PKH6 230 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 SNX32Q86XE0 403 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 GTF2H4Q92759 462 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 DVL3Q92997 716 aaPredicted RBP13.16□□□□□ -0.3
PALB2-205ENST00000567003 EPYCQ99645 322 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 DDX28Q9NUL7 540 aaKnown RBP13.16□□□□□ -0.3
PALB2-205ENST00000567003 TMEM38BQ9NVV0 291 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 THUMPD1Q9NXG2 353 aaKnown RBP13.16□□□□□ -0.3
PALB2-205ENST00000567003 GLTPQ9NZD2 209 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 NOTCH1P46531 2555 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 CLIC1O00299 241 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 ADORA3P0DMS8 318 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 OR8G3PP0DMU2 310 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 BMP2P12643 396 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 CDH12P55289 794 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
PALB2-205ENST00000567003 SELENOVP59797 346 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 PCGF3Q3KNV8 242 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 FAM91A1Q658Y4 838 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 LRFN4Q6PJG9 635 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 PIWIL3Q7Z3Z3 882 aaKnown RBP13.15□□□□□ -0.3
PALB2-205ENST00000567003 MAVSQ7Z434 540 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 PXKQ7Z7A4 578 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 KIRREL3Q8IZU9 778 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 ANKRD42Q8N9B4 389 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 OR6S1Q8NH40 331 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 OR52B2Q96RD2 323 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 GAL3ST1Q99999 423 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 CENPHQ9H3R5 247 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 RNF121Q9H920 327 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 DECR2Q9NUI1 292 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 SLC25A37Q9NYZ2 338 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 UBAP1Q9NZ09 502 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 SELENONQ9NZV5 590 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 ZIM2Q9NZV7 527 aa13.15□□□□□ -0.3
PALB2-205ENST00000567003 TESQ9UGI8 421 aaKnown RBP13.15□□□□□ -0.3
PALB2-205ENST00000567003 ISPDA4D126 451 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 DNAJC9-AS1A6NH13 148 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 TRPC5OSA6NMA1 111 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 SPRY3O43610 288 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 ETS2P15036 469 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 ZFP36P26651 326 aaKnown RBP13.14□□□□□ -0.31
PALB2-205ENST00000567003 AQP1P29972 269 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 TEKQ02763 1124 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 FOXL1Q12952 345 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 FADDQ13158 208 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 GCNT6Q5T4J0 391 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 TMEM53Q6P2H8 277 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 MSANTD1Q6ZTZ1 278 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 MSRB3Q8IXL7 192 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 BCL6BQ8N143 479 aaPredicted RBP13.14□□□□□ -0.31
PALB2-205ENST00000567003 OR5J2Q8NH18 312 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 C11orf40Q8WZ69 217 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 C1orf147Q96MC9 270 aaPredicted RBP13.14□□□□□ -0.31
PALB2-205ENST00000567003 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
PALB2-205ENST00000567003 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
PALB2-205ENST00000567003 TCF7L2Q9NQB0 619 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 DCAF16Q9NXF7 216 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 SLCO1C1Q9NYB5 712 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 GPR160Q9UJ42 338 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 TANC2Q9HCD6 1990 aa13.14□□□□□ -0.31
PALB2-205ENST00000567003 SLC22A23A1A5C7 686 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 DHHO43323 396 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 IGHV1-46P01743 117 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 FPR2P25090 351 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 MPV17P39210 176 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 UCP2P55851 309 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 CDK6Q00534 326 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 TBC1D28Q2M2D7 210 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 HFEQ30201 348 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 HHATQ5VTY9 493 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 TREML4Q6UXN2 200 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 CCL17Q92583 94 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 RAB1CQ92928 201 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 LRRC58Q96CX6 371 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 TMEM43Q9BTV4 400 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 SDR39U1Q9NRG7 319 aaPredicted RBP13.13□□□□□ -0.31
PALB2-205ENST00000567003 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 ZNF69Q9UC07 566 aa13.13□□□□□ -0.31
PALB2-205ENST00000567003 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms