RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 OR8J3Q8NGG0 315 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 PFN4Q8NHR9 129 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 HIST1H2ACQ93077 130 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 ZNF583Q96ND8 569 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 SH3GL3Q99963 347 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 ECSITQ9BQ95 431 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 SYT3Q9BQG1 590 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 MYEF2Q9P2K5 600 aaKnown RBP15.76■□□□□ 0.11
USB1-213ENST00000566292 SPEF1Q9Y4P9 236 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 MRASO14807 208 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 SYNGR3O43761 229 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 BCL10O95999 233 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 MT-ND1P03886 318 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 SERPINA5P05154 406 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 QDPRP09417 244 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 OR8G3PP0DMU2 310 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 RPL18Q07020 188 aaKnown RBP15.75■□□□□ 0.11
USB1-213ENST00000566292 HIST3H3Q16695 136 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 COQ5Q5HYK3 327 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 FAM120AOSQ5T036 256 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 DEF8Q6ZN54 512 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 TMEM255BQ8WV15 326 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 ZNF347Q96SE7 839 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 SH3GL1Q99961 368 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 SAR1AQ9NR31 198 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 REV1Q9UBZ9 1251 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 FBXL3Q9UKT7 428 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 FZR1Q9UM11 496 aa15.75■□□□□ 0.11
USB1-213ENST00000566292 M0R233 179 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 OR7A10O76100 309 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 TGFAP01135 160 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 IGHG1P01857 330 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 F13BP05160 661 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 FUT1P19526 365 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 ALDH3B1P43353 468 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 OR1E2P47887 323 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 ARFIP2P53365 341 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 SEC24CP53992 1094 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 TAS2R41P59536 307 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 MYBPC1Q00872 1141 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 GALK2Q01415 458 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 PIN1Q13526 163 aaPredicted RBP15.74■□□□□ 0.11
USB1-213ENST00000566292 MAD2L1BPQ15013 274 aaPredicted RBP15.74■□□□□ 0.11
USB1-213ENST00000566292 TRIP10Q15642 601 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 MMEL1Q495T6 779 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 GKAP1Q5VSY0 366 aaPredicted RBP15.74■□□□□ 0.11
USB1-213ENST00000566292 PAQR4Q8N4S7 273 aaPredicted RBP15.74■□□□□ 0.11
USB1-213ENST00000566292 OR4K5Q8NGD3 323 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 ASB10Q8WXI3 467 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 TMEM158Q8WZ71 300 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 MCHR2Q969V1 340 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 MRPL13Q9BYD1 178 aaKnown RBP15.74■□□□□ 0.11
USB1-213ENST00000566292 C20orf141Q9NUB4 165 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 FGFR1OP2Q9NVK5 253 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 RIMS3Q9UJD0 308 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 BAG5Q9UL15 447 aa15.74■□□□□ 0.11
USB1-213ENST00000566292 BBIP1A8MTZ0 92 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 OR5F1O95221 314 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 NPPAP01160 153 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 TROVE2P10155 538 aaKnown RBP eCLIP15.73■□□□□ 0.11
USB1-213ENST00000566292 SRD5A1P18405 259 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 TCN1P20061 433 aaPredicted RBP15.73■□□□□ 0.11
USB1-213ENST00000566292 AQP2P41181 271 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 RBM34P42696 430 aaKnown RBP15.73■□□□□ 0.11
USB1-213ENST00000566292 CHN2P52757 468 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 CLRN1P58418 232 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 RPS23P62266 143 aaKnown RBP15.73■□□□□ 0.11
USB1-213ENST00000566292 ELFN2Q5R3F8 820 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 ERICH5Q6P6B1 374 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 SYT14Q8NB59 555 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 NOXO1Q8NFA2 376 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 C10orf82Q8WW14 230 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 TMEM239Q8WW34 195 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 SGTBQ96EQ0 304 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 SNX18Q96RF0 628 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 SEPHS2Q99611 448 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 REPIN1Q9BWE0 567 aaKnown RBP15.73■□□□□ 0.11
USB1-213ENST00000566292 POLR2J2Q9GZM3 115 aaKnown RBP15.73■□□□□ 0.11
USB1-213ENST00000566292 POLR2J3Q9H1A7 115 aaKnown RBP15.73■□□□□ 0.11
USB1-213ENST00000566292 SLC7A8Q9UHI5 535 aa15.73■□□□□ 0.11
USB1-213ENST00000566292 LOC100653049A0A140TA62 436 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 A0A1W2PRG6 482 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 ENTPD5O75356 428 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 TRMUO75648 421 aaKnown RBP15.72■□□□□ 0.11
USB1-213ENST00000566292 KRT34O76011 436 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 IGF2P01344 180 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 HPXP02790 462 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 TSPAN19P0C672 248 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 CCL2P13500 99 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 APEX1P27695 318 aaKnown RBP15.72■□□□□ 0.11
USB1-213ENST00000566292 SLC30A7Q8NEW0 376 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 MOSPD2Q8NHP6 518 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 LIPHQ8WWY8 451 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 MS4A5Q9H3V2 200 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 INIPQ9NRY2 104 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 MRGBPQ9NV56 204 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 DUSP13Q9UII6 198 aa15.72■□□□□ 0.11
USB1-213ENST00000566292 FAM220BPB1ANY3 271 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 MCIDASD6RGH6 385 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 FARS2O95363 451 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms