RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
CDH1-208ENST00000565810 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.89□□□□□ -1.31
CDH1-208ENST00000565810 BTLAQ7Z6A9 289 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 TMEM123Q8N131 208 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 MARVELD2Q8N4S9 558 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 CYB561A3Q8NBI2 242 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 SLC37A3Q8NCC5 494 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 NAXEQ8NCW5 288 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 NPEPL1Q8NDH3 523 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 PROKR2Q8NFJ6 384 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 TMEM163Q8TC26 289 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 TMEM54Q969K7 222 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 MCHR2Q969V1 340 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 LRRC46Q96FV0 321 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 IL4I1Q96RQ9 567 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 RBM24Q9BX46 236 aaKnown RBP6.89□□□□□ -1.31
CDH1-208ENST00000565810 MRPL13Q9BYD1 178 aaKnown RBP6.89□□□□□ -1.31
CDH1-208ENST00000565810 SYT4Q9H2B2 425 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 OR51V1Q9H2C8 321 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 RERGLQ9H628 205 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 SRA1Q9HD15 236 aaKnown RBP6.89□□□□□ -1.31
CDH1-208ENST00000565810 RPRD1BQ9NQG5 326 aaKnown RBP6.89□□□□□ -1.31
CDH1-208ENST00000565810 CLN6Q9NWW5 311 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 SLC5A6Q9Y289 635 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 GPR52Q9Y2T5 361 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 FKBP7Q9Y680 259 aa6.89□□□□□ -1.31
CDH1-208ENST00000565810 DNAJC13O75165 2243 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 NCKAP5O14513 1909 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 OR6C68A6NDL8 312 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 SLC22A31A6NKX4 558 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 EEF1E1-BLOC1S5C9J1V9 151 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 E9PQ18 207 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 DHHO43323 396 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 EEF1E1O43324 174 aaKnown RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 SLC16A7O60669 478 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 UPK3AO75631 287 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 CLIC3O95833 236 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 IGHV3-9P01782 118 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 MPGP29372 298 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 CHRNB4P30926 498 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 NTF4P34130 210 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 SNRPGP62308 76 aaKnown RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 ROR2Q01974 943 aaKnown RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 TGFBR3Q03167 851 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 FAPQ12884 760 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 STK11Q15831 433 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 SLC25A35Q3KQZ1 300 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 SLC35D3Q5M8T2 416 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 ZNF362Q5T0B9 420 aaPredicted RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 LCN1P1Q5VSP4 162 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 NXNL2Q5VZ03 156 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 TFAP2EQ6VUC0 442 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 Q6ZT83 130 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 NCCRP1Q6ZVX7 275 aaPredicted RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 THAP5Q7Z6K1 395 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 MRGPRGQ86SM5 289 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 LUZP2Q86TE4 346 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 CCDC71Q8IV32 467 aaPredicted RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 CPOQ8IVL8 374 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 GID4Q8IVV7 300 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 FAM26EQ8N5C1 309 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 ZNF610Q8N9Z0 462 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 RHOXF1Q8NHV9 184 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 CA5BP1Q8WTZ4 195 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 NSMAFQ92636 917 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 RFKQ969G6 155 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 CCDC120Q96HB5 630 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 MUS81Q96NY9 551 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 ALKBH3Q96Q83 286 aaPredicted RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 NUAK2Q9H093 628 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 CRLF2Q9HC73 371 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 GPR35Q9HC97 309 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 HINT3Q9NQE9 182 aaKnown RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 RASSF1Q9NS23 344 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 PRSS50Q9UI38 385 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
CDH1-208ENST00000565810 B9D1Q9UPM9 204 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 MOKQ9UQ07 419 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 RNF6Q9Y252 685 aa6.88□□□□□ -1.31
CDH1-208ENST00000565810 KALRNO60229 2985 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 PRRC2CQ9Y520 2896 aaKnown RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 SVILO95425 2214 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 CIB4A0PJX0 185 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 SH3D21A4FU49 640 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 FAM183AA6NL82 134 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 A8MXE2 369 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 RPL36A-HNRNPH2H7BZ11 118 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 M0R129 80 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 PRODHO43272 600 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 DENRO43583 198 aaKnown RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 GLCEO94923 617 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 FARS2O95363 451 aaKnown RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 CGAP01215 116 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 HLA-DQA2P01906 255 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 CTLA4P16410 223 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ZNF823P16415 610 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 SPI1P17947 270 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms