RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SNX18Q96RF0 628 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 DDOQ99489 341 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 SLX1AQ9BQ83 275 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 ALG12Q9BV10 488 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 EMC6Q9BV81 110 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 HCAR1Q9BXC0 346 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 OR51V1Q9H2C8 321 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 AMBNQ9NP70 447 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 RPRD1BQ9NQG5 326 aaKnown RBP9.85□□□□□ -0.83
SF3B3-205ENST00000564899 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 KLHL9Q9P2J3 617 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 TPRKBQ9Y3C4 175 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 FLVCR1Q9Y5Y0 555 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 FREM3P0C091 2139 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF407Q9C0G0 2248 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 IGKV3D-15A0A087WSY6 115 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 SLC35F4A4IF30 521 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 MAGEA13PA6NCF6 341 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 TRMUO75648 421 aaKnown RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 IGHG1P01857 330 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 HTR1FP30939 366 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 SLC25A1P53007 311 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 CLRN1P58418 232 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 RPS7P62081 194 aaKnown RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF91Q05481 1191 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 LGALS3BPQ08380 585 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 APOFQ13790 326 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 RNPS1Q15287 305 aaKnown RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 CARD17Q5XLA6 110 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 MEPCEQ7L2J0 689 aaKnown RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 ZGRF1Q86YA3 2104 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 WDFY1Q8IWB7 410 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 MCEMP1Q8IX19 187 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 ZIC4Q8N9L1 334 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF540Q8NDQ6 660 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 NOXO1Q8NFA2 376 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 PTP4A1Q93096 173 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 SLC25A44Q96H78 314 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 TRIB1Q96RU8 372 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 NMNAT2Q9BZQ4 307 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 SYT4Q9H2B2 425 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF696Q9H7X3 374 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 PLCXD1Q9NUJ7 323 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 VSX1Q9NZR4 365 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 CLCF1Q9UBD9 225 aa9.84□□□□□ -0.83
SF3B3-205ENST00000564899 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 RPL36Q9Y3U8 105 aaKnown RBP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 NIPBLQ6KC79 2804 aaeCLIP9.84□□□□□ -0.83
SF3B3-205ENST00000564899 NAV3Q8IVL0 2385 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 SLC22A23A1A5C7 686 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 CCDC182A6NF36 153 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 EFCAB10A6NFE3 127 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 SLC22A31A6NKX4 558 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 AHRRA9YTQ3 701 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 PTGES3LE9PB15 166 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GPR171O14626 319 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ZG16O60844 167 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 TGM6O95932 706 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GYPBP06028 91 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 TPOP07202 933 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 PGA4P0DJD7 388 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 PGA3P0DJD8 388 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 CLUP10909 449 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 DBTP11182 482 aaKnown RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ABOP16442 354 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 SPI1P17947 270 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 SLC2A5P22732 501 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 EEF1B2P24534 225 aaKnown RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GABARAPL2P60520 117 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 DBPQ10586 325 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 TMED1Q13445 227 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 CAMK2DQ13557 499 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 SF3B4Q15427 424 aaKnown RBP eCLIP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ACSF3Q4G176 576 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 LCN1P1Q5VSP4 162 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GTF2IRD2BQ6EKJ0 949 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF585AQ6P3V2 769 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 DNM1P34Q6PK57 102 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GFRALQ6UXV0 394 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 AHSA2Q719I0 299 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ADGRE4PQ86SQ3 457 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GTF2IRD2Q86UP8 949 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 SYT14Q8NB59 555 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 PROKR2Q8NFJ6 384 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 OR2T4Q8NH00 348 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 IPCEF1Q8WWN9 437 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 GGHQ92820 318 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 TMEM45BQ96B21 275 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF775Q96BV0 537 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 RNFT2Q96EX2 444 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 OR2M2Q96R28 347 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 RHNO1Q9BSD3 238 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 RERGLQ9H628 205 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ASB6Q9NWX5 421 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 WARS2Q9UGM6 360 aaKnown RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 PSORS1C1Q9UIG5 152 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 ING1Q9UK53 422 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-205ENST00000564899 CLEC4AQ9UMR7 237 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms